Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0434 ATGAGTGCTGTCAACATCACTAACGTAACCGTTTTGGATAATCCGGCGGCTTTTCTGAACCCTTTTCAATTTGAAATCTCTTACGAGTGCTTGATTCCCCTCAAAGATGATTTGGAATGGAAGCTCATTTATGTGGGGTCTGCTGAGGATGAGACTTATGACCAACTCTTGGAGAGTGTGCTTGTTGGGCCTGTCAATGTTGGCAACTATCGCTTTGTGTTTCAAGCAGACCCTCCAGACCCGTCAAAAATTCGTGAAGAGGATATTATTGGTGTCACAGTACTGCTATTAACATGTTCTTATCTGGGTCAGGAATTTATCCGAGTGGGATATTATGTCAACAATGATTATGACGATGAACAGCTAAGAGAAGAGCCTCCCCAAAAGGTGTTGATTGATAGGGTTCAAAGAAATATTTTGGCTGACAAGCCCAGAGTAACGAAATTTCCTATCAACTTTCATCCTGAGAACAATGAGCATGGGGAACAGCCCCCTCCTTCACCTGAAATCAATGAGAATGGAGAACAACCACCACCTTCACACCATGACCCTTCTGACTGA 561 0.4332 MSAVNITNVTVLDNPAAFLNPFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPQKVLIDRVQRNILADKPRVTKFPINFHPENNEHGEQPPPSPEINENGEQPPPSHHDPSD* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0434 186 FunFam Histone chaperone ASF1 1 157 - -
Vvi1g0434 186 SUPERFAMILY ASF1-like 1 153 IPR036747 GO:0005634|GO:0006325
Vvi1g0434 186 PANTHER ANTI-SILENCING PROTEIN 1 1 172 IPR006818 GO:0005634|GO:0006325
Vvi1g0434 186 Pfam ASF1 like histone chaperone 1 153 IPR006818 GO:0005634|GO:0006325
Vvi1g0434 186 Gene3D - 1 157 IPR036747 GO:0005634|GO:0006325
Vvi1g0434 186 MobiDBLite consensus disorder prediction 146 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0434 Vvi-Chr1 4064822 4072782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0434 K10753 - vvi:100266239 389.037