Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0353 ATGGAAATGGCAGTGGAAGGTGGAGGACCTCAAGTCCACAAGAAGGTAATGGTGGCCATTGACGAGAATGAGTGCAGTTACCATGCTCTTATGTGGGTACTCCATAATCTTAAAGAATCTATCGGCAACTCTCCTCTCGTCATCTTCAACGCTCAGCCTCCTCCCTACCGTAACAACACTTTTGCTGCCTCTCTCGGCACTGCTCGCATGTACTGTCCCGTCTCTGCCGCTCCGGAGTTTATCAACAATGTCCAAGAACAAAACAAGAAAGTTTCAGCGGCTCTCTTAGAGAAAGCTAAGAGTATCTGCTCTAGCCAAGGGGTGAATGCTGAGACAATTTCTGAAGTTGGGGATGCCCAACAGGCCATATGTGATGCCGTTCAAAAGTTGAACATCACTCTCCTTATTTTAGGTGATCGTGGCATTGGAAAAATAAAGAGGGCTTTTCTAGGGAGCGTGAGCAACCACTGCGTTAATAACGCTAAGTGCCCTGTACTGGTTGTGAAGAAATCGAGTTGA 519 0.4701 MEMAVEGGGPQVHKKVMVAIDENECSYHALMWVLHNLKESIGNSPLVIFNAQPPPYRNNTFAASLGTARMYCPVSAAPEFINNVQEQNKKVSAALLEKAKSICSSQGVNAETISEVGDAQQAICDAVQKLNITLLILGDRGIGKIKRAFLGSVSNHCVNNAKCPVLVVKKSS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0353 172 PRINTS Universal stress protein signature 147 169 IPR006015 -
Vvi1g0353 172 PRINTS Universal stress protein signature 13 31 IPR006015 -
Vvi1g0353 172 PRINTS Universal stress protein signature 129 141 IPR006015 -
Vvi1g0353 172 Gene3D HUPs 11 172 IPR014729 -
Vvi1g0353 172 Pfam Universal stress protein family 14 169 IPR006016 -
Vvi1g0353 172 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 14 170 - -
Vvi1g0353 172 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 169 - -
Vvi1g0353 172 CDD USP_Like 15 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0353 Vvi-Chr1 3332583 3333672 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0353 - - vvi:100249069 345.125