Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0350 ATGAGTCCCACAAAGTTTCATGATGAGCAACAGCCGAGGAAGGAGATCAATGGTCCACGTCCATCTCCATTGAAGATCAACAAGGATTCTCATTCCATTAACAAACCATCATCCACTTTATCCTTCTCTAAGCCACCTGCGGCGAAGCATCAGCAGCGACATCCCGTAATCATATACACACATTCACCCAAGATCATCCACACGCAAGCTCGTGATTTTATGGCCTTGGTGCAGAAGCTCACGGGTCTGTCTTCGTCCTCCGATAGTGTTCAGAATAATGCACCAGCCCAACCGCAGGAGGCTGTCAAGGCTTCCTCAAGGGATGATAACGAGTCGTCTTCGGTTCTTACTGATGACCATTGCGGTGGTGCTGGTGATGCTCAGGTCAGCTCATCTTCCGTTTCTCCAATCTTCAACGCCTCCAATCCTTACCTTGCAGATATCCCTCTATTCACCCCGAATTCCACTGATTTCTTCTGCTCTCCCTGCCCCTTTTATAGATATCCCGATCCGGCTTTCAGCTCCCCAAACATGGCCAATTCAATCTCACCTTCTGTTTTTGAGTTCATGAAAGGACTCCCAGAATATTGA 591 0.4805 MSPTKFHDEQQPRKEINGPRPSPLKINKDSHSINKPSSTLSFSKPPAAKHQQRHPVIIYTHSPKIIHTQARDFMALVQKLTGLSSSSDSVQNNAPAQPQEAVKASSRDDNESSSVLTDDHCGGAGDAQVSSSSVSPIFNASNPYLADIPLFTPNSTDFFCSPCPFYRYPDPAFSSPNMANSISPSVFEFMKGLPEY* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0350 196 MobiDBLite consensus disorder prediction 1 53 - -
Vvi1g0350 196 PANTHER F16F4.1 PROTEIN-RELATED 10 175 IPR039607 -
Vvi1g0350 196 MobiDBLite consensus disorder prediction 1 15 - -
Vvi1g0350 196 MobiDBLite consensus disorder prediction 85 100 - -
Vvi1g0350 196 MobiDBLite consensus disorder prediction 27 46 - -
Vvi1g0350 196 Pfam VQ motif 60 86 IPR008889 -
Vvi1g0350 196 MobiDBLite consensus disorder prediction 85 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0350 Vvi-Chr1 3318207 3318797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0350 - - vri:117921543 389.037