Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g0315 | ATGGAGACACCAAGGCTGGTACTGAAGTTCGTATGGATGGAGAAGAACATTGGGGTGGCGTTGGATCAAGTGATACCAGGCTATGGCACCAATCCACTGAGCCCGTACTACTTCTGGCCAGGGAAAGATGCATGGGAGGAGCTCAAGTCCACTCTAGAGAGTAAGCCATGGATATCTCAGAAGAAGATGATTATTCTTCTCAATGAGGCTACTGATATCATCAATTTGTGGCAGCAGAGTGGTGGCAATCAATCTTAG | 258 | 0.4729 | METPRLVLKFVWMEKNIGVALDQVIPGYGTNPLSPYYFWPGKDAWEELKSTLESKPWISQKKMIILLNEATDIINLWQQSGGNQS* | 86 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g0315 | 85 | PANTHER | 30S RIBOSOMAL PROTEIN 3, CHLOROPLASTIC | 1 | 84 | IPR006924 | GO:0003735|GO:0005840|GO:0006412 | |
| Vvi1g0315 | 85 | Pfam | Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) | 33 | 79 | IPR006924 | GO:0003735|GO:0005840|GO:0006412 | |
| Vvi1g0315 | 85 | Gene3D | - | 5 | 85 | IPR038447 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi1g0315 | Vvi-Chr1 | 3007154 | 3007411 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi1g0315 | K19032 | - | pop:7488345 | 160.999 |