Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0283 ATGACTGTTTCTCCGGTTCCTTCGCCCAAGGGTCGTGTCCTCATTGCCGGAGCAACCGGTTTCATTGGTCAGTTCGTGGCCGCAGCAAGCCTGGATGCCCATCGACCCACCTATATTCTCGCACGTCCAGGCCCCAGAAGTCCTTCTAAGGCCAACATCTTCAAGGCCCTCGAGGACAAAGGCGCCATCATCGTATACGGGTTGATAAACGAGCAGGAGGCTATGGAGAAGATACTAAAAGAACATGAGATAGACATAGTAGTATCAACCGTGGGCGGAGAGAGCATATTGGATCAAATCGCCCTAGTGAAAGCCATGAAGGCTGTTGGAACCATTAAGAGATTTTTGCCGTCTGAATTCGGGCACGATGTGAACAGAGCTGATCCAGTTGAGCCAGGGCTCAACATGTACAGAGAGAAGCGTAGGGTCCGACAATTAGTGGAGGAATCGGGCATACCCTTCACTTACATCTGCTGCAACTCAATTGCTTCTTGGCCATACTACAATAACATTCACCCTTCTGAGGTTCTTCCTCCAACGGATTTCTTCCAGATTTACGGTGATGGCAATGTCAAAGCTTACTTTGTTGCAGGCACAGACATCGGAAAATTCACGATGAAAACAGTGGACGATGTCCGAACACTGAACAAATCAGTGCATTTCCGGCCATCTTGCAATTGTCTCAATATAAATGAACTCGCATCTGTGTGGGAAAAGAAGATTGGGAGGACACTTCCCAGAGTAACCGTCACTGAAGATGATCTACTAGCTGCAGCCGGAGAAAACATCATCCCACAGAGTGTGGTAGCGGCGTTCACGCACGACATTTTCATAAAGGGGTGTCAGGTGAATTTCTCTATTGATGGCCCGGAGGACGTGGAAGTGACCACCCTCTACCCTGAGGATTCTTTCAGGACGGTGGAGGAATGCTTCGGCGAATACATTGTGAAGATAGAGGAAAAGCAGCCGACCGCCGATTCTGCTATTGCCAACACCGGTCCTGTGGTTGGGATGCGGCAAGTCACTGCAACCTGCGCTTGA 1041 0.4966 MTVSPVPSPKGRVLIAGATGFIGQFVAAASLDAHRPTYILARPGPRSPSKANIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVKIEEKQPTADSAIANTGPVVGMRQVTATCA* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0283 346 Gene3D - 12 301 - -
Vvi1g0283 346 CDD PCBER_SDR_a 12 310 IPR045312 GO:0016491
Vvi1g0283 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 259 IPR036291 -
Vvi1g0283 346 Gene3D - 161 311 - -
Vvi1g0283 346 PANTHER PINORESINOL REDUCTASE-RELATED 10 311 - -
Vvi1g0283 346 Pfam NmrA-like family 13 244 IPR008030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0283 Vvi-Chr1 2632996 2635975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0283 K13081 - vvi:100232982 696.427