Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0213 ATGGCTGCGATTTGGCGTTCCCGTCATTCTCGCAAGTTTCTTCAATCATCTCCCTCTCTCTCCTCTTCACTCTCTCCATTTTTTCCACTTTCAAACCCTAACCCTATTCCTAAACCTAATCCTAATCCTACCAGTTCTCCTATCAAATCCTTTGAACGCACTTACTTCGACTATCAATTTTCTCGAGAAAATTTGAGCTGCTTTTCCAGGGAAAATTTCAAATTCGGTCAATGCGGCTCAATTTGCAGATTCGGTGCTGGAATCTCCACGTCCTCGTCTGGTGTTGCCGAGAAGGATGATGAGGATCGGGGAAGAGATGACGGTGGCGGCGAAAGGCCAAAGGTTCAAGATTTGTCATGGATTGATTTGTATCTCCCGAAGCAGGCGCGTCCCTACGCGCGTCTTGCTCGCTTGGATAAGCCAATTGGGACGTGGTTGCTTGCCTGGCCATGTATGTGGTCAATTACGCTGGCTGCAAACCCTGGACACTTTCCTGATATTAAGATGTTGGCACTATTTGGTACTGGGGCTTTGCTATTAAGGGGTGCTGGATGTACCATAAATGACCTCCTTGATCAGGATATTGATCCAAAGGTGGAACGCACAAAACTGAGACCAATTGCAAGTGGTATTTTAACACCGTTTCAAGGGCTTTCTTTTCTTGGATTTCAATTGCTCCTGGGTCTTGGGATTCTCCTTCAACTCAACAATGACAGCCGCATTTTGGGAGCTTCATCCTTACTGCTAGTCTTCTCCTATCCCCTCATGAAGAGGCTGACATTTTGGCCTCAAGCCTATCTAGGTTTAACCTTTAACTGGGGAGCTTTATTAGGATGGTCTGCAGTTAGAGGAAGTTTGGATCCTGCCATTGTCTTCCCACTGTACATTTCTGGAGTGTGTTGGACTCTTGTGTATGACACAATTTATGCACATCAGGATAAAGAAGATGATTTGAAGGTGGGTGTTAAATCCACGGCCTTGAGATTTGGGGACTCAACAAAGGAGTGGCTTTCAGGGTTTGGAATTGCTTGTATTAGTAGTCTTGCCCTCAGTGGATTCAATGCTGATCTTGGATGGCCTTATTATGTGGCTTTGATGGCTGCATCTGGGCATTTAACGTGGCAGATTTGGACAGTTGACTTATCATGCCGTGCTGATTGCAATAGGAAGTTTGTGTCCAACAAGTGGTTTGGTGCTATTCTTTTTGGGGGAATTTTGCTTGGAAAACTCTCATCATAA 1239 0.452 MAAIWRSRHSRKFLQSSPSLSSSLSPFFPLSNPNPIPKPNPNPTSSPIKSFERTYFDYQFSRENLSCFSRENFKFGQCGSICRFGAGISTSSSGVAEKDDEDRGRDDGGGERPKVQDLSWIDLYLPKQARPYARLARLDKPIGTWLLAWPCMWSITLAANPGHFPDIKMLALFGTGALLLRGAGCTINDLLDQDIDPKVERTKLRPIASGILTPFQGLSFLGFQLLLGLGILLQLNNDSRILGASSLLLVFSYPLMKRLTFWPQAYLGLTFNWGALLGWSAVRGSLDPAIVFPLYISGVCWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWLSGFGIACISSLALSGFNADLGWPYYVALMAASGHLTWQIWTVDLSCRADCNRKFVSNKWFGAILFGGILLGKLSS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0213 412 Gene3D UbiA prenyltransferase 142 290 IPR044878 -
Vvi1g0213 412 PANTHER PRENYLTRANSFERASES 102 411 IPR039653 -
Vvi1g0213 412 ProSitePatterns UbiA prenyltransferase family signature. 188 210 IPR030470 -
Vvi1g0213 412 Hamap 4-hydroxybenzoate octaprenyltransferase [ubiA]. 125 410 IPR006370 GO:0004659|GO:0016020
Vvi1g0213 412 MobiDBLite consensus disorder prediction 90 113 - -
Vvi1g0213 412 CDD PT_UbiA_COQ2 136 408 IPR039653 -
Vvi1g0213 412 NCBIfam 4-hydroxybenzoate polyprenyltransferase 130 408 IPR006370 GO:0004659|GO:0016020
Vvi1g0213 412 MobiDBLite consensus disorder prediction 95 113 - -
Vvi1g0213 412 MobiDBLite consensus disorder prediction 1 23 - -
Vvi1g0213 412 FunFam 4-hydroxybenzoate octaprenyltransferase 291 411 - -
Vvi1g0213 412 Pfam UbiA prenyltransferase family 148 391 IPR000537 GO:0016020|GO:0016765
Vvi1g0213 412 FunFam 4-hydroxybenzoate polyprenyltransferase, mitochondrial 142 291 - -
Vvi1g0213 412 Gene3D UbiA prenyltransferase 291 411 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0213 K06125 - vvi:100247403 725.702