Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0182 ATGCTGAGGACTCTTCGTTCCCGGCGCCGTCCTCGTTACGGTGCACAGGTGTGCGCCGTCATCGCTGCTCTTCTTCTCCTCTTGTCGGTCACAGTTCTGCACAGTCGCCTTAGCTTCTCTCGCGACTCCCGCCTCTCCCCCAAAGTAGGGTTAGGGTTACGGTTTCCAAATTCTAAAGTTCCCCCAATAGACCCTCAAAACGACGCCGTTGTACTAGATCCGCTCACTCAGGACTCCGATCCCGGTGGAAACTCCGGCGCCGACGACCGGATCGACGAGCTCGATGTGATGGAAGAGGAGGCGGATCAGGCTGGGCTTTCCAATGAGGAGGAGATTCTGAGAGGGGTGGAGTCGGAGGATGAGGAGGTCGGTGAGTCTAGGGTTTCTGGGTATTTCTTTGATCATGTGAGCGGGGTCATACGACGAGCTTTTGATAAGCGTTCGATCGATCAGTGGGAGGATTATGTGGGTTTTGATGTTGGATCGGGTATGGAGGATCGGAGCAAGGGCGTGTTTGCGTCGGATGATGTGGTGGTTGATGAGGAGGTGAGGAGGAAGGTGGGAGAGGTGGATGGGATCGAAGACATGCTTTTGTTGAAGACGGGGCGGCGAGCAAATCCATTGAGAGAGGGCTGGGGCCCTTGGTTTGATACAAAAAGCGATTTTCTGAGAAGGGATAGAATGTTCAAGTCGAATTTGGAGGTGTTGAATCCGATGAATAATCCACTTCTGCAGGATCCCGACGGGATCGGAATTACCAGCCTGACTAGGGGTGATAGACTTGTTCAGAAGTTTTTGTTGAACAAATTTAAGAAAGTTCCTTTCCTGGTTAAGAAACCATTGGGTGTTTCAGCTACTACAAATCTTGGATCGAGATTGGTAGAAGATGGTGGTCAAGTGGCAATTAAGATACGTGATAGTTTAAATGTACAGAAAACCACATTGGGGAGTGATGTGGAAGGTAGAAGAACTGAAATTAGGAGAGCTGAGCGCAGAACTTTACATGACAGCTATGGTTTTGGTTTGGATACTAAAAAAATTGTCGATGTTAATGAGGTTTTAAATGGCACTACTACTGGGAATTCATCATACAAGCATGATAGGAATGAGACTGTTGAATACAAAAGCGTGCAAAATATTAGTGAATTGGGTCACAAGAATGGGGATTCTAAAGCTAGGAGATTGGGTCACAATAATGAGGATTCCAAAGCTAGGAGGAAATCTGAGTTGTCTGGTCACATATACGCTGATGGGAAGAGATGGGGATATTTTCCTGGTTTACATCCCCGCTTATCTTTTTCAAACTTCATGAATGCGTTCATCAGGAAAGGGAAGTGTCGGATGAGGTTTTTCATGGTGTGGAATTCCCCACCATGGATGTTTAGCATTAGACACCAACGTGGTCTTGAGAGTCTACTCTCCCACCATCGAGATGCTTGTGTTGTGGTATTTTCTGAGACAATTGAGCTTGATTTCTTCAAAGACTTTGTAGAGAAGGGTTTCAAAGTTGCTGTTGCCATGCCAAATCTTGATGAACTTCTGAAGAATACAGCAGCTCATATATTTGCATCTGTCTGGTTTGAATGGAGAAAAACAAACTTCTATTCTACTCACTACAGTGAACTTGTTCGTCTTGCTGCTCTCTACAAATATGGTGGAATCTATCTTGATTCTGACATTATTGTCGTGAAACCTCTTTCTTCACTTAATAATTCTGTTGGCTTAGAGGATCAACTTGCTGGAAGTTCTTTAAATGGTGCTGTGATGGTATTTAGAAAGGACAGCCCTTTCATAATGGAGTGCTTGAATGAGTTCTATTCAACATATGATGATACATGTTTGAAGTGTAATGGGGCTGATCTTTTGACAAGAGTTGCTAAAAAATTTTTGAGTAAAGAAAATGCCTCTGATAAACAGCTGGAGCTTCTAGTGCAGCCCTCCTTTATTTTCTTCCCTATTAGTCCTCACAATATCACAAGGTACTTTACTACACCTGCAACAGAAACTGAAAAGGCTGAGCAAGATATTTTGTTTTCAAAGATTCTGAATGAGTCTTTCACATTTCATTTTTGGAATAGCTTGACATCATCTCTCATTCCAGAGCCTGAGAGTCTTGTAGCAAGGCTTATTGACCACTCATGTATCCGATGCTCTGATGTGTTATGA 2166 0.4418 MLRTLRSRRRPRYGAQVCAVIAALLLLLSVTVLHSRLSFSRDSRLSPKVGLGLRFPNSKVPPIDPQNDAVVLDPLTQDSDPGGNSGADDRIDELDVMEEEADQAGLSNEEEILRGVESEDEEVGESRVSGYFFDHVSGVIRRAFDKRSIDQWEDYVGFDVGSGMEDRSKGVFASDDVVVDEEVRRKVGEVDGIEDMLLLKTGRRANPLREGWGPWFDTKSDFLRRDRMFKSNLEVLNPMNNPLLQDPDGIGITSLTRGDRLVQKFLLNKFKKVPFLVKKPLGVSATTNLGSRLVEDGGQVAIKIRDSLNVQKTTLGSDVEGRRTEIRRAERRTLHDSYGFGLDTKKIVDVNEVLNGTTTGNSSYKHDRNETVEYKSVQNISELGHKNGDSKARRLGHNNEDSKARRKSELSGHIYADGKRWGYFPGLHPRLSFSNFMNAFIRKGKCRMRFFMVWNSPPWMFSIRHQRGLESLLSHHRDACVVVFSETIELDFFKDFVEKGFKVAVAMPNLDELLKNTAAHIFASVWFEWRKTNFYSTHYSELVRLAALYKYGGIYLDSDIIVVKPLSSLNNSVGLEDQLAGSSLNGAVMVFRKDSPFIMECLNEFYSTYDDTCLKCNGADLLTRVAKKFLSKENASDKQLELLVQPSFIFFPISPHNITRYFTTPATETEKAEQDILFSKILNESFTFHFWNSLTSSLIPEPESLVARLIDHSCIRCSDVL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0182 721 SUPERFAMILY Nucleotide-diphospho-sugar transferases 416 697 IPR029044 -
Vvi1g0182 721 Pfam Glycosyltransferase sugar-binding region containing DXD motif 464 577 IPR007577 -
Vvi1g0182 721 MobiDBLite consensus disorder prediction 382 407 - -
Vvi1g0182 721 PANTHER OS07G0567300 PROTEIN 1 721 IPR044789 -
Vvi1g0182 721 MobiDBLite consensus disorder prediction 386 407 - -
Vvi1g0182 721 Pfam Alpha 1,4-glycosyltransferase conserved region 591 720 IPR007652 -
Vvi1g0182 721 Gene3D - 375 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0182 Vvi-Chr1 1653556 1662964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0182 13 550 Glycosyltransferase AT4G19900 47.849 2.85e-149 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0182 - - vvi:100268073 1376.3