Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0179 ATGGCTCGATCTGCACTGGACGAGATGTCAGAATCTGGTGCTTTTATGAGAACTGCATCAACATTCCGTAATTTTGTCACCCGAGACCCGAACTCCCCATTCCCAGCAGAATCTGGAAGATACCATCTGTATGTATCATATGCCTGTCCTTGGGCATCCAGGTGCCTTGCCTACTTGAAGATCAAAGGACTTGACAAAGCCATCAGTTTTACGTCAGTGAAACCCAAATGGGAAAGAACAAGGGATACAGATGAGCATATGGGGTGGGTGTTTCCTGCTTCTGATACAGAGGAACCTGGAGCTGGACCTGACCCTTTGAATGGAACCAGAAGTATAAGAGAACTTTACGAGCTAGCAAGCACAAACTACTCAGGAAAATACACAGTTCCTGTTCTATGGGATAAGAAGCTCAAAACAATTGTGAACAATGAGAGTTCAGAGATAATCCGCATGTTCAATACTGAATTCAATGATATAGCAGAGAATCCATCTTTGGACCTTTATCCTCCCCATTTGCAAGCCCAGATCGACAAGATCAATGACTGGATATACAGTGGGATAAACAATGGTGTCTACAAATGTGGGTTCGCCAAAAAACAGGAGCCTTATGATGAGGCTGTGAAAAACTTGTATGAAGCATTGGACAAATGTGAAGAGATACTCAGCAAGCAACGATTCCTTTGTGGGAACACGCTCACTGAATCTGATATTCGATTGTTTGTCACCCTTATCAGATTTGATGAGGTTTATGCAGTTCATTTCAAATGCAACAAGAAACTTCTCCGCGAGTACCCAAATCTGTTCAATTACACGAAAGAAATTTTCCAGATCCCAGGTATGAGCAGCACTGTACACGTGGAACATATCAAGAAGCATTACTATGGAAGCCACCCTTCTATCAATCCTTTTGGGATCATCCCTCAAGGGCCAGATGTAGACTACTCTGCTCCCCATGACAGAGAGAGGTTTTCTTCATAG 978 0.4325 MARSALDEMSESGAFMRTASTFRNFVTRDPNSPFPAESGRYHLYVSYACPWASRCLAYLKIKGLDKAISFTSVKPKWERTRDTDEHMGWVFPASDTEEPGAGPDPLNGTRSIRELYELASTNYSGKYTVPVLWDKKLKTIVNNESSEIIRMFNTEFNDIAENPSLDLYPPHLQAQIDKINDWIYSGINNGVYKCGFAKKQEPYDEAVKNLYEALDKCEEILSKQRFLCGNTLTESDIRLFVTLIRFDEVYAVHFKCNKKLLREYPNLFNYTKEIFQIPGMSSTVHVEHIKKHYYGSHPSINPFGIIPQGPDVDYSAPHDRERFSS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0179 325 PIRSF GST 1 321 IPR016639 GO:0004364
Vvi1g0179 325 Gene3D - 176 325 - -
Vvi1g0179 325 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 169 293 IPR010987 -
Vvi1g0179 325 FunFam Glutathione S-transferase family protein 176 325 - -
Vvi1g0179 325 Gene3D Glutaredoxin 2 175 - -
Vvi1g0179 325 SUPERFAMILY GST C-terminal domain-like 170 322 IPR036282 -
Vvi1g0179 325 Coils Coil 320 325 - -
Vvi1g0179 325 Pfam Glutathione S-transferase, N-terminal domain 48 155 IPR004045 -
Vvi1g0179 325 PANTHER GLUTATHIONYL-HYDROQUINONE REDUCTASE 1 323 IPR016639 GO:0004364
Vvi1g0179 325 FunFam Glutathione S-transferase family protein 1 175 - -
Vvi1g0179 325 Pfam Glutathione S-transferase, C-terminal domain 203 271 - -
Vvi1g0179 325 CDD GST_C_Omega_like 169 310 IPR047047 -
Vvi1g0179 325 SFLD Xi.1 7 323 IPR016639 GO:0004364
Vvi1g0179 325 SUPERFAMILY Thioredoxin-like 23 158 IPR036249 -
Vvi1g0179 325 SFLD Xi (cytGST) 7 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0179 Vvi-Chr1 1642257 1643621 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0179 K07393 - vvi:100268002 678.707