Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0167 ATGACTCATGAACAAAGAGAAGGAGGTTACTCCAGCCCACATTGGAAAGGCGATGGTTCTACACTTGACCAAAGTTTCTCAGGATTGATTAAAGTCCCTGTTAAGGCTCTAGACATCACATGGGGTAATGATACTCGGTTTTGGCAACAGATAGATCTTACGGATCATGATACCCAGGAGATCGGATTCAAGGAAGGTATGCTGCTCCTTCAGGTGAATTGGATTGAAGTCAAAGGAAATCTGAATATCACTCCCACTGAGGACACAAAATATGAAATATATTATATGGTCAAGTTCAGGGTTGATGCATTTGGTTGGCATTCAGCTCCTATCAAGTTCAAGGTGAGACACAAAGGAGAAGAGACACACAGTAACATTATGATATTGGAGTCCTACAGAGAGAAACATGATGTGTGGCATGAAATTCCAGGTGGTGAATTCTCAGTTGCATCAAAGGACCCTGTGAATGTTGAATTTGGTATCTTTGAAGTTGATAGTGACTGGTGGAAGGGTGGTATGGTTCTTGGAGGAGTTAAGATTAAGGCAAAATCAGGTTGA 558 0.4158 MTHEQREGGYSSPHWKGDGSTLDQSFSGLIKVPVKALDITWGNDTRFWQQIDLTDHDTQEIGFKEGMLLLQVNWIEVKGNLNITPTEDTKYEIYYMVKFRVDAFGWHSAPIKFKVRHKGEETHSNIMILESYREKHDVWHEIPGGEFSVASKDPVNVEFGIFEVDSDWWKGGMVLGGVKIKAKSG* 186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0167 185 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 32 180 - -
Vvi1g0167 185 Pfam Phloem protein 2 33 181 IPR025886 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0167 Vvi-Chr1 1563622 1564509 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0167 - - vri:117915543 388.267