Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0906 ATGCATGCTAGGCATCGAAGTCCTGGAAATGGATATAGGCTCAGTTCTATGGGAATGGGCATGGCTGCCTCTCGGATCTCACCCGAAGGCTCAATTAGAGGACATGGCTTCCATAACTCTGAGTACCGAAACTTTAATCGTGGTTTTGGGCGGGGTCAATCAAAACCCTATCAACAGCCTCACTTGTCCCGGAAAGGTGACATTTTCATGGAAGCCGGTAGACTAGCAACTGAGTATTTGATTTCTACGGGGTTGCTTCCTCCTAGTGCGCTTCCTGTGAAATGGCAGAATGGTAGTTTGAAGAAGCAGGTGGGGGATTTCCAGGATGGCGAAAATTTGCAGCTTCCTGCAGAGGGTCGGACATCAGCGCTTGCCCGCTTGGGAAATGCTGTTTCTGATTCGGGTTCTGGTAGGAGAAGGTTCTCTGATGAATATAACCCAACGGGGTCGAGAAATCATACCAGAGGAAGGAGGAGAATGGGATCCTTTCGGAGTTATGGCACTGATTGGAATGGAAGAAGTGGGTCGTGGGATAAGGCTAGGGCTTCCCCTGATACAGAGGGTGATGAAGATTCTACTTGTGGGTACCCTGAGGAGCAGCTAGTTGGTAAAGATGTAGGTAGTGGGGTTCAGAAGTCCAGACCGGGTGAATTACCCCCAATAATTGATGATGTGGGTGATTCAGAAACTGAGCCAGAGAACACCCAACTTCCGGATGATATGAGCTCAAAAGCAGGTTCTTCTCGAGTTGGGAGAGATATCCCACTTGAGACAGATGGGGAACTCAATAAGAGGCCTGATGATTCCAGAGTATTAGATCTGGCACCTGGGGAAATGAAGGACGGTACCCATAATGATAGTGATGATGAAACTGAGAAACAGACTGCCTCAGAGGATTTAACCATCCAGGATAGTGCAGTGGATGATGATATCGCTGGCAAGAGTGGTACTGATTTGCTAAGATTGTGCAACTTTGCCAAGGTGCCCACCAAAACTCGTTCTTCATTGATGTATAAGGCCTTAAAGATCGATCTAACTCCAACTACTGCAAAGGGAAACACTTCCGATATTGGACCCCTAAGGGGATCTAGCTATTCCAGTGAAGACAATCCTGTCGAGGAGTCCTTGGGTGGGGCACTGTCAGATCAAACTCAAAAATCACAATGTCTCAACTTGGATGTTTCTAGAGCTCTTACTGTAGAGTCCTTGGAGGATGCTGAAGAATTGGATTCTAAACATGTTGTGGAGCAGGGTAAATGTGTGAGGTCTCAGTCTTTCCCGGAGAGAGCTTTCATGTATGAGCAGGAAGCAAGTCAGGGACCCCCTGGGTTTGGAAGGTGCAGCTCCATGGTTAAGGAGAGAGGTGAGAAACGGGCTGGACAACAGAGCGACGCAATGGAGGGAATCAAGAAACTTAAAGAATGGCTTCCCTCCTTGGTTAGTAGGAGCGAGGAGTGCTTCACTCTTTCTAACTTGAGCAAAATGCAAACAAGTTCACAGGAGAGGGCTTCACCTGTTGATGAGGTGGTTTCAACTGCCAATGAAAAGAACTCTATGGATATTTCCCTGTTTCCAAAAAGTGGAGGTGAGCAATGTATTGAGTTTGCAGAAGAGAAGCAGCTTCTCCCAAGTTCATTTAAGATATGTGACCTTAATCTCATGGGAACTTCTGATATGAATGAGAATCATGATACTGATCCGATTCTTTTGTTTCCCTCTATTCTGGAAACCAAAAAAGAAGCAGCACCAGTTGATATTGATTTGTCAATCAGTAATTGCTGCAATTTGTCAGATGAATGTGGTGGGCGTCCTGCTGATGGCAAGGAGGTTGAAGTAATTGATTTGGAAAATGACTCTGGACCAGAAGACAATGCCTTACCTAATTCAGAGAGAAAGCACTTTGTTAGTCTTCCAAGTGTTGGCTGCAGGACAGAAAGTGTATTCATGGAGCTGGAGACCTTTCCCAACCATGCGCAGAATACCAGTGATGTGCCTGATGCGCAGGATGGTTATGGTCTTATGATCTCAGAGTTGCTTGGAAATGATATCTCAAATTGTTCTTCAGTACCTACAGATATTAATTCTCTGGATCATGAGATGAACCTTCATAATGGAGAGGGAATGCTTGGTGGTGATGATGATTCAATATATATGTCGCTGGGAGAAATACCAATAAGCCTTTTGCGGGTTTGGGAGCAGCCAACACAAGAATATGAGAAGCCCTTCTGA 2229 0.4576 MHARHRSPGNGYRLSSMGMGMAASRISPEGSIRGHGFHNSEYRNFNRGFGRGQSKPYQQPHLSRKGDIFMEAGRLATEYLISTGLLPPSALPVKWQNGSLKKQVGDFQDGENLQLPAEGRTSALARLGNAVSDSGSGRRRFSDEYNPTGSRNHTRGRRRMGSFRSYGTDWNGRSGSWDKARASPDTEGDEDSTCGYPEEQLVGKDVGSGVQKSRPGELPPIIDDVGDSETEPENTQLPDDMSSKAGSSRVGRDIPLETDGELNKRPDDSRVLDLAPGEMKDGTHNDSDDETEKQTASEDLTIQDSAVDDDIAGKSGTDLLRLCNFAKVPTKTRSSLMYKALKIDLTPTTAKGNTSDIGPLRGSSYSSEDNPVEESLGGALSDQTQKSQCLNLDVSRALTVESLEDAEELDSKHVVEQGKCVRSQSFPERAFMYEQEASQGPPGFGRCSSMVKERGEKRAGQQSDAMEGIKKLKEWLPSLVSRSEECFTLSNLSKMQTSSQERASPVDEVVSTANEKNSMDISLFPKSGGEQCIEFAEEKQLLPSSFKICDLNLMGTSDMNENHDTDPILLFPSILETKKEAAPVDIDLSISNCCNLSDECGGRPADGKEVEVIDLENDSGPEDNALPNSERKHFVSLPSVGCRTESVFMELETFPNHAQNTSDVPDAQDGYGLMISELLGNDISNCSSVPTDINSLDHEMNLHNGEGMLGGDDDSIYMSLGEIPISLLRVWEQPTQEYEKPF* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0906 742 MobiDBLite consensus disorder prediction 129 308 - -
Vvi19g0906 742 MobiDBLite consensus disorder prediction 348 383 - -
Vvi19g0906 742 PANTHER PROTEIN, PUTATIVE-RELATED 1 742 IPR040276 -
Vvi19g0906 742 MobiDBLite consensus disorder prediction 254 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0906 Vvi-Chr19 10551208 10562166 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0906 - - vvi:100258275 1494.56