Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0866 ATGGTGAGAGAAACCAAAGGTAAGAGAAGCACAATGAATGTAAAAAGAGCAAGAGCAAATCAAAAGCAAATTGAAGGCCAATCTCCAGAATGGGTGATCAACATCAATAAGCGTTGTAAAGAAGGGCCTCAGTATGACTGCGGAAAATGGTTGACAATCTATCATGTCCCAATGAACATAAGAGAAGTTCATAAAAATGCTTTTGCCCCAAAAATTATGTCCATTGGTCCCTTACATTATGGGGACCCAGGGCTAAGGTTCATGGAAGAACACAAGATGCGGTATCTTTTACGCCTTTTAGGATCCAGGACCCCTGAAAATGTAGAACAGGCAGAGGACTTGGTGCCACAAGTTCATCGGGCTATTCTCTTGGAGGATCTCGAAGGAGCCATGAAGGAGTTGGAGCAGAAGACAAGGCAGTGCTACACAGGAGCTTTTGATATTGACAGCAATGATTTTGTTCAAATGATGGTCATCGACGGTTGCTTTGTGCTTGAACTATTGCGCCTTTACAACAGGTTTGAAAGGGAGAAAAATGTAGATGACCCCATCTTCACCATCCGCTGGATGCTGCGGACACTTCAGCGTGATTTATTGAAGCTCGAGAATCAGCTGCCTTTCTTTGTTCTTAAAAAGCTATTTGAGCTAATTAGCTTGGCTGAGGATCCACCACTGATTGATCTTGTACTCACATTCTTTGATCCCTTGCTGCCAAGGAAAAATATTGAAGGGAATCTGAACCCTGAAGGTGAATTTGATCATATGCTTGAGGTGTTTCGTTCAACCTTCCTTTCATCTGTCAACCAAGATATTACATCTGGATGTGAGCAATTGAAAATCTCTGTCAACGTTCCCCTTGTTCAAGAGAGACAGCTAATTCATAGTGTAACAGAGCTTGAGAAGGCAGGAGTTAAGCTAAAAAAGAGAGAGGACTGTGATTTGCTAGACATCAATTTTCAAGCTGGGGTGTTAAAAATCCCTCCTCTGTACATTGATGATAACACTGCTGTTCTCTTCCTAAATTTTGTGGCCTATGAGCAGTGTGAAGACACTAAACCTTTTTTCACCAATTACTTAATGTTCTTTGACAGCTTAATCAATTCTTCAGCCGACGTCGGGATTCTTCACAAAAATGGGATCATCAATCATGTTTTGGGAAGTGATCAGGATGTAGCCGATCTTTTCAATAAGCTCGGTCGTGAGGTTGTCTATGATTTGGATGAGTGCTACTTGTCTCAACAAATAAAGAGAGTTAATAACTACTGCAAGACATACTATGCTAGCAAATGGCGTGTTTGGTTTACAAACTTGAAACATGACTATTTCAGTAATCCATGGACATTTTTCTCACTTCTTGCGGCCATTGCCCTTTTGTTACTCACCACTGCTCAAACTTATTATACTGTGTATGGTTACTATAGTCCTTCATAG 1431 0.4102 MVRETKGKRSTMNVKRARANQKQIEGQSPEWVININKRCKEGPQYDCGKWLTIYHVPMNIREVHKNAFAPKIMSIGPLHYGDPGLRFMEEHKMRYLLRLLGSRTPENVEQAEDLVPQVHRAILLEDLEGAMKELEQKTRQCYTGAFDIDSNDFVQMMVIDGCFVLELLRLYNRFEREKNVDDPIFTIRWMLRTLQRDLLKLENQLPFFVLKKLFELISLAEDPPLIDLVLTFFDPLLPRKNIEGNLNPEGEFDHMLEVFRSTFLSSVNQDITSGCEQLKISVNVPLVQERQLIHSVTELEKAGVKLKKREDCDLLDINFQAGVLKIPPLYIDDNTAVLFLNFVAYEQCEDTKPFFTNYLMFFDSLINSSADVGILHKNGIINHVLGSDQDVADLFNKLGREVVYDLDECYLSQQIKRVNNYCKTYYASKWRVWFTNLKHDYFSNPWTFFSLLAAIALLLLTTAQTYYTVYGYYSPS* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0866 476 Coils Coil 120 140 - -
Vvi19g0866 476 MobiDBLite consensus disorder prediction 1 23 - -
Vvi19g0866 476 PANTHER BNAC04G53230D PROTEIN 47 469 - -
Vvi19g0866 476 Pfam Plant protein of unknown function 53 460 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0866 Vvi-Chr19 9811973 9814352 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0866 - - vvi:100253232 954.896