Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0854 ATGACTGTGGGAGCTGGGATCACTGTGGCTGATGGCAATCTCGTGGTTCTCGGAAACGCCATTCTTTCCGATGTGCATGACAACATTGTTACAACTCCTGCCGCCGGAGACTCCCTTACCAACGGAGCTTTCATCGGCGTTCACTCTGACCGCTTGGGCAGTCGCCGGGTCTTTCCTGTTGGCAAGCTCCAGGGTTTGAGATTTATGTGTGTTTTCCGCTTCAAGTTGTGGTGGATGACACAGAGGATGGGGTCTTGTGGCCAAGACATTCCCTTTGAGACCCAATTTTTGATTGTTGAAGGACAAAATGGTTCTCATTTTGGCGAGGGAAGTGAGATGGGAGCCGGCCAATCTGCTCTGTATGTCGTTTTCTTACCCATTCTTGAAGGCGATTTTAGAGCTGTTCTTCAAGGAAATGAACATAATGAGATAGAGATCTGCTTGGAAAGTGGAGATCCGGCAGTTGATGGATTTGAGGGGAGTCATTTGGTTTTTGTGGCAGCAGGATCAAACCCATTTGATGTCATCACAAATGCTGTAAAGACAGTTGAGAAACATTTGCAGACATTTAGTCATCGAGATAAAAAGAAGATGCCCAATATGCTGAACTGGTTTGGCTGGTGTACTTGGGATGCTTTTTATACCGATGTTACTGCAGAGGGTGTAAGACAAGGATTAAAGAGTTTAGAGAAAGGTGGGATACCTCCAAAGTTTGTTATAATTGATGATGGATGGCAATCGGTCGGCATGGATACCACTGGTATCAAGTGCAAAGCTGATAACACAGCCAACTTTGCTAGCAGGTTAACCCATATCAAAGAGAACCACAAATTTCAGAAGGATGGTAAAGAGGGTCACAGGGTAGAGGATCCAGCTATGGGACTTCACCACATTGTTACTGAAATCAAAGAAAAACACTATCTAAAGTATGTTTATGTGTGGCATGCTATAACGGGCTACTGGGGCGGTGTTAGTCCTGGGATTACTGAAATGGAACTCTATGAATCTAAGATATCCTACCCAATTTCGTCTCCAGGTGTTAACTCAAATGAGCCTTGTGAAGCTTTGACAAGCATAGTTACTAATGGGCTTGGCCTTGTGAACCCCGAAAAAGTTTTTAGCTTCTACAATGAACTCCACTCATATCTAGCATCAGCTGGTATTGATGGAGTGAAAGTAGATGTCCAGAACATCCTTGAAACACTTGGTGCAGGTCATGGTGGCAGGGTAAAACTTGCTCAAAAATACCATCAGGCACTAGAGGCATCTATCTCAAGAAACTTCCAGGATAATGGAATTATATCTTGTATGAGTCACAACACAGATGGTTTGTACAGTTCAAAGCGTACAGCTGTAATTAGAGCATCAGATGATTTTTGGCCAAGAGATCCTGCATCACACACAATTCACATTGCATCAGTTGCTTACAACACTATTTTCCTTGGGGAATTTATGCAGCCAGATTGGGATATGTTTCATAGCTTACACCCAATGGCTGAATACCATGGAGCAGCTCGTGCCGTGGGTGGCTGTGCTATTTATGTCAGTGACAAACCTGGACACCATGACTTTAATCTACTGAAGAAGCTTGTACTTTCTGATGGTTCTATATTGAGAGCCAAACTTCCAGGAAGACCAACAAGGGATTGCTTATTCTCTGATCCTGCCAGAGATGGAATAAGCCTTCTAAAGATATGGAATCTGAATGATTTCTCCGGAGTCGTGGGTGTGTTCAATTGCCAGGGAGCTGGGTGGTGCAGAGTTGGAAAAAAGAACCTTATCCACGATGAGCAGCCTGGGACAATAACTGGGGTTATCAGAGCTAAAGACGTTGATTATCTACCAAGAGTGGCTGACGATGGATGGAATGGGGATACTATCATTTTTTCCCATCTTGGTGGAGAGGTAGTTTATCTGCCAAAGAACGCGTCTATTCCAATGACACTAAAGTCTCGGGAGTATGAAGTTTTTACAGTGGTTCCTGTTAAGGCATTGTCAAATGGTGCCACGTTTGCTCCCATAGGCCTAATCAAGATGTTCAATTCAGGAGGAGCCATTAAGGAATTGAAATATGAAAGGGAGAGAAATGCAACTGTGGGCATGAAAGTTCGCGGGTCTGGAATATTTGGTGTCTATTCATCATCTCGGCCAAAGAGAATAATAGTTGACACAGAAGAAATGAAGTTCGAATATGAAGAAGGGTCTGGACTGACCACCATTAATTTGAAAATTCCAGAGGAAGAAATGTACCTTTGGAATATAACTATTGAATTATGA 2277 0.4339 MTVGAGITVADGNLVVLGNAILSDVHDNIVTTPAAGDSLTNGAFIGVHSDRLGSRRVFPVGKLQGLRFMCVFRFKLWWMTQRMGSCGQDIPFETQFLIVEGQNGSHFGEGSEMGAGQSALYVVFLPILEGDFRAVLQGNEHNEIEICLESGDPAVDGFEGSHLVFVAAGSNPFDVITNAVKTVEKHLQTFSHRDKKKMPNMLNWFGWCTWDAFYTDVTAEGVRQGLKSLEKGGIPPKFVIIDDGWQSVGMDTTGIKCKADNTANFASRLTHIKENHKFQKDGKEGHRVEDPAMGLHHIVTEIKEKHYLKYVYVWHAITGYWGGVSPGITEMELYESKISYPISSPGVNSNEPCEALTSIVTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLAQKYHQALEASISRNFQDNGIISCMSHNTDGLYSSKRTAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGHHDFNLLKKLVLSDGSILRAKLPGRPTRDCLFSDPARDGISLLKIWNLNDFSGVVGVFNCQGAGWCRVGKKNLIHDEQPGTITGVIRAKDVDYLPRVADDGWNGDTIIFSHLGGEVVYLPKNASIPMTLKSREYEVFTVVPVKALSNGATFAPIGLIKMFNSGGAIKELKYERERNATVGMKVRGSGIFGVYSSSRPKRIIVDTEEMKFEYEEGSGLTTINLKIPEEEMYLWNITIEL* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0854 758 PANTHER - 1 755 IPR008811 -
Vvi19g0854 758 FunFam Probable galactinol--sucrose galactosyltransferase 1 202 529 - -
Vvi19g0854 758 Pfam Raffinose synthase or seed imbibition protein Sip1 8 741 IPR008811 -
Vvi19g0854 758 ProSiteProfiles cAMP/cGMP binding motif profile. 624 699 IPR000595 -
Vvi19g0854 758 SUPERFAMILY (Trans)glycosidases 204 530 IPR017853 -
Vvi19g0854 758 Gene3D Aldolase class I 200 507 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0854 Vvi-Chr19 9552576 9556723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0854 1 757 Glycoside Hydrolase AT1G55740 73.650 0.0 1151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0854 K06617 - vvi:100253252 1557.73