Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0853 ATGTTTGGGAGGCAGCTGGTGTCCATTCTCAGGAGGAACAAGCTTCAAAATTGCTTTTTCAATGAATCTTCTTCTAGGGTTTTGAATGGACGGCCCAGATTATTTTCTTCTGAACTTGGTGGTAGTTCTGGCGCACAAAGAAACGCCTTGTATGGCTTCAGATCATTGATCAAGGATTTTCATAAACCATGGTTGAGGAATATGTCCACCACTGCAACTGCTACTGTAGAGAATAAGGAGGGATTGAAATTACTTGTAACTGCAGGGCCCCGTGCTCAGAAAATGGTTGGGATATGGCTTTTTGGTTCTGCTGCATGGGTGTTTAGTATGGTCGTACTTGGCGGTGTTACACGACTGACCCGATCTGGTCTTTCAATGACTGACTGGAAATTCACTGGTAACCTCCCTCCCCTATCAGATGAGGACTGGTTGGCTGAGTTTGAGAAATATAAGCAATCTCCTGAGTACAAGCGTGTAAACAAAGGGATGAGTATTGAAGATTTTAAATTCATATATTGGATGGAGTATGCACATCGTATGTGGGGAAGGGCATTGGGTATCATGTTTGCTCTGCCATTTTCATATTTTCTTCACAAGGGATACATTACCTTGCGACTTGGACTGAGACTCTCTGCTCTCTTTGGCCTTGGTGCTGGGCAGGGACTAATTGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAGCCAGCATCTGAATATGCTCAGCCAAGAGTAAGCCCTTATCGTCTCACGGCTCATCTTACTTCAGCATTTGTTATTTACTGTGGCCTTCTCTGGACCGCTCTTTCTGTTGTTATGCCTGAACCACCTGCTGAATCAGTAGCTTGGGTTCGTGGGGCTGCAAAAGTTAAGAGGCTCGCCCTTCCTATAAGCATCCTTGTCGGCATTACTGCTGTTTCAGGAGCATTTGTTGCAGGAAATGATGCCGGCCATGCATATAATACTTTTCCCAAGATGGGTGACAATTGGATTCCAGATGATATTTTTAGCATGGAGCCATTCATACGCAACTTCTTTGAGAATACATCAACAGTGCAGCTTGACCACCGTATCCTTGCGACTGCAACATTAATGTCAATTGGCATTTTGTGGTGGTCAACAAGAAAATTGGACATACATCCAGCAGTACGATTTTTAATTGGAAACACCATTGGCATGGCTGCTCTTCAGGTCACTTTAGGGATATCAACTCTCCTATCATATGTACCTGTTTCACTCGGCACTGCACATCAGGCTGGAGCTTTAACTCTTTTGTCGCTCATGGTCCTCCTTAATCACACTGTACGGAGGCCATCAATGTTCCTTCTCAAATCTCTGCCTCCGGTCACAAGGACACCTTGA 1359 0.4474 MFGRQLVSILRRNKLQNCFFNESSSRVLNGRPRLFSSELGGSSGAQRNALYGFRSLIKDFHKPWLRNMSTTATATVENKEGLKLLVTAGPRAQKMVGIWLFGSAAWVFSMVVLGGVTRLTRSGLSMTDWKFTGNLPPLSDEDWLAEFEKYKQSPEYKRVNKGMSIEDFKFIYWMEYAHRMWGRALGIMFALPFSYFLHKGYITLRLGLRLSALFGLGAGQGLIGWWMVKSGLEEPASEYAQPRVSPYRLTAHLTSAFVIYCGLLWTALSVVMPEPPAESVAWVRGAAKVKRLALPISILVGITAVSGAFVAGNDAGHAYNTFPKMGDNWIPDDIFSMEPFIRNFFENTSTVQLDHRILATATLMSIGILWWSTRKLDIHPAVRFLIGNTIGMAALQVTLGISTLLSYVPVSLGTAHQAGALTLLSLMVLLNHTVRRPSMFLLKSLPPVTRTP* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0853 452 Hamap Heme A synthase [ctaA]. 93 437 IPR023754 GO:0006784|GO:0016020|GO:0016653
Vvi19g0853 452 Pfam Cytochrome oxidase assembly protein 98 428 IPR003780 GO:0006784|GO:0016020|GO:0016653
Vvi19g0853 452 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 70 447 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0853 K02259 - vvi:100251414 912.138