Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0850 ATGGGAAGTGAAGGAGATGATCAACAGTCTCCATTACTGGGAAGCTACGCTTCATCTTTTGATCCAGAGGAGTCTTTCCAAAGAACAGGGACCCAATGGACTGCAATGGCACACGTGATAACAGGAGTGATAGGGGCAGGGGTACTGTCTCTTGCATGGAGCGTGGCTCAGCTTGGGTGGATTGCAGGTCCACTGATGTTGATAGTATTTGCAGGGATCACCGTTCTTTCTACCTACCTTCTCTGTGACTGCTACAGATCACCTGATCCTGAACATGGCCCCACCAGAAATAGCTCTTACACCCAGGCTGTTAAATTCTATCTAGGAGACAAGAACCAACGCTGGTGCGGACTCTTCGCCAATGAGAGCCTCTACGGAGTTGGAATCGCCTACAACATTACTGCTGCCTCCAGCGTCAGAGCAATTCAGAGATCAAACTGCTACCACAAGGAAGGGCATAATGCTTCATGTGCATATGGAGATACTTTCTATATGTTGCTATTTGGAGTTATTCAGATTGTAATGTCTCAGATACCAGATTTCCATAACATGGAATGGCTCTCAATTGTTGCTGCAATCATGTCCTTCTCCTACGCTTCCATTGGATTAGGACTTGGCTTTGCAAAAGTAGTAGAAAATGGGATGATTAAGGGCAGTATTGAAGGAATCTCAGCTTCTAATACAGCTGACAAAATATGGTTGGTCTTTCAAGCGCTTGGAGACATCGCCTTTGCCTATCCATACTCATTAATTCTTCTTGAAATACAGGATACTTTGAAGGCCCCTCCACCAGAAAACAAGACCATGAAGAAGGCCTCAATGTCTGCAATCCTTATTACCACTTTCTTCTACCTTTGCTGTGGATGCTTTGGATATGCAGCCTTCGGGGATGATACACCAGGAAATCTCTTGACAGGTTTTGGATTTTTCGAACCTTACTGGCTCATCGACTTTGCTAATGCTTGCATCATTCTTCATCTTGTGGGTGGTTATCAGGTGTATAGCCAGCCAGTGTTTGCATTTGTGGAAAGATGGGTTACCAGAAAGTTCCCAAACAGTGGATTTGTGAATAAATTCTACACCTTAAAACTCCCATTGCTGCCAGCTTTCCAGATGAATCTTCTCAGGATATGCTTTCGAACTACGTATGTTATATCTACAACTGGAATTGCGATGATTTTCCCTTACTTCAACCAGGTTTTGGGATTGTTGGGGGCACTTAACTTTTGGCCTTTGGCTATATATTTTCCAGTAGAAATGTACTTAGTGCAAAAGAAAATAGGGGCTTGGACAAGAACATGGATCATTCTTCGGACGTTTAGCCTTGTGTGCTTGCTTGTATCAATACTTACCCTAGTTGGGTCTGTTGAAGGAATAATAAGTGCCAAGGTAAGCTAG 1398 0.4371 MGSEGDDQQSPLLGSYASSFDPEESFQRTGTQWTAMAHVITGVIGAGVLSLAWSVAQLGWIAGPLMLIVFAGITVLSTYLLCDCYRSPDPEHGPTRNSSYTQAVKFYLGDKNQRWCGLFANESLYGVGIAYNITAASSVRAIQRSNCYHKEGHNASCAYGDTFYMLLFGVIQIVMSQIPDFHNMEWLSIVAAIMSFSYASIGLGLGFAKVVENGMIKGSIEGISASNTADKIWLVFQALGDIAFAYPYSLILLEIQDTLKAPPPENKTMKKASMSAILITTFFYLCCGCFGYAAFGDDTPGNLLTGFGFFEPYWLIDFANACIILHLVGGYQVYSQPVFAFVERWVTRKFPNSGFVNKFYTLKLPLLPAFQMNLLRICFRTTYVISTTGIAMIFPYFNQVLGLLGALNFWPLAIYFPVEMYLVQKKIGAWTRTWIILRTFSLVCLLVSILTLVGSVEGIISAKVS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0850 465 PANTHER OS05G0424000 PROTEIN-RELATED 31 459 - -
Vvi19g0850 465 Pfam Transmembrane amino acid transporter protein 29 460 IPR013057 -
Vvi19g0850 465 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0850 Vvi-Chr19 9488866 9495765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0850 18 462 Organic Solute Cotransporters AT1G10010 53.898 5.93e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0850 K24917 - vvi:100254980 948.732