Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0849 ATGTCTCTGAAGGCAATGGAGGAAACAGCTGGAGATCATGAGACCCCATTACTGAACTCAACCTATGTTTCAGGTGTTCAACCAGTGGAATCTCCTACCAAGAGAACTGGGAGCCTGTGGACAGCAGTTGCCCATATCATAACTGGAGTGATAGGGTCTGGAGTCCTATCCCTTGCATGGTGTGTGGCTCAGCTGGGGTGGATTGCAGGTCCTGTGTCCATGCTGTTATTTGCATTTGTCACCCTTCTTTCTACCTTCCTCCTTTGCGATTCCTACAGATCTCCAGATCCAGAATGCGGCCCCGGCAGAAATCGCTCATACCTGGAAGCTGTTCACATCAACTTAGGAAGCAGGAGTGCATGGGTGTGTGCCCTGGTGGTGTATATAAGTTTATATGGGATTGGAATTGCCTATACTATTACGTCTGCTATCAGCATGAGGGCAATTAACAAATCAAATTGTTATCACAGAGAAGGGCATGATGCTGCTTGTGCATATGGAGATAATTCTTTTATGCTAGTATTTGGAGCCATTCAAATTGTAACATCTCAAATACCCGATTTCCATAACATAGAATGGCTCTCAGTTGTGGCTGCAGTCATGTCATTCTGCTATTCTTTCATTGGATTGGGACTAGGCCTTGCCAAGACCATAGGAGATGGGAAAATCAAGGGAAGCATTGAAGGGATCTCGACTTCCACTGTAGCTGAAAAAGTATGGCTGATCTCCCAAGCCCTTGGAGACATTGCATTTGCCTATCCCTACTCCTTAATCAGCATTGAGATTCAGGACACTTTGAAGTCACCCCCACCAGAAAGTGAGACCATGAAGAAGGCATCAACTCTGGCAATAACTGTCACAACCCTCTTCTACCTCTTCTGTGGAGGCTTTGGATATGCAGCCTTTGGGGATGACACACCAGGAAACCTCTTGACAGGGTTCGGGTTCTACGAGCCATACTGGCTTGTTGACTTCGCAAATGCTTGTGTGGTGGCTCATTTGGTTGGAGGGTATCAGATATACACCCAACCACTATTCGGAATGGTGGACAGATGGTCTGCCCAGAAGTTCCCCAACAGTGGATTTGTAAACAACGATTACGTCTTCAAACTGCCATTGTTGCCAGCATTCAGAGTGAACTTGTTCAGACTCTGTTTCAGAACAGCTTATGTTGGAACAACAACTGGAATAGCCATGATCTTCCCATACTTCAACCAGGTTTTGGGGGTGATAGGAGCCATGAACTTTTGGCCCTTGGCTATATATTTTCCAGTGGAAATGTACTTTGTGCAGAGGAAAATTGGAGTCTGGACAAGAATGTGGCTTCTTCTTCAAATATTTAGCTTTGTTTGCTTGGTTGTCACCGTTTTTGCATTCGTTGGATCAGTGGAAGGACTTATAACTGCAAAACTAAGCTAA 1419 0.4531 MSLKAMEETAGDHETPLLNSTYVSGVQPVESPTKRTGSLWTAVAHIITGVIGSGVLSLAWCVAQLGWIAGPVSMLLFAFVTLLSTFLLCDSYRSPDPECGPGRNRSYLEAVHINLGSRSAWVCALVVYISLYGIGIAYTITSAISMRAINKSNCYHREGHDAACAYGDNSFMLVFGAIQIVTSQIPDFHNIEWLSVVAAVMSFCYSFIGLGLGLAKTIGDGKIKGSIEGISTSTVAEKVWLISQALGDIAFAYPYSLISIEIQDTLKSPPPESETMKKASTLAITVTTLFYLFCGGFGYAAFGDDTPGNLLTGFGFYEPYWLVDFANACVVAHLVGGYQIYTQPLFGMVDRWSAQKFPNSGFVNNDYVFKLPLLPAFRVNLFRLCFRTAYVGTTTGIAMIFPYFNQVLGVIGAMNFWPLAIYFPVEMYFVQRKIGVWTRMWLLLQIFSFVCLVVTVFAFVGSVEGLITAKLS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0849 472 PANTHER OS05G0424000 PROTEIN-RELATED 37 463 - -
Vvi19g0849 472 Pfam Transmembrane amino acid transporter protein 35 467 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0849 Vvi-Chr19 9482389 9486430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0849 34 467 Organic Solute Cotransporters AT5G09220 53.776 8.13e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0849 K24917 - vvi:100260073 960.288