Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0847 ATGCATCTGTACAATGCCTGGCTTCCACCCCCTGTGGCGGAGGCGACGAAGGGAGAGAAGGAGGCCTTCGGCCGCGTTGTAGCGGCAGTGAAGGAGGCGTGGCGGCCGGAGGATCCTGAATCTGTGTATTCCACTCTCAAATGGATTTCAGTCATTGACCTTTTCATAAAGGCGAAAAGTGAAGTATGTTTAGAAGACGTGGGTGCACTTACGGAAATTGGTTTAGAATTGTTTCACAAATCACATAATAAACTTTATGCCCAGGTTAGATGGGGGAACATTCTAGTCAGGTTACTTAACAAGTACCGAAAGAAGTTGGCCTTGAAAGTTCAATGGCGACCTTTCTACGATACTTTGATCCAGACACACTTCACAAGGAATACCGGCCCAGAAGGGTGGAGACTGAGACAACGACATTTTGAGACTGTGACATCTCTTGTTCGATCGTGCCGGAGGTTCTTCCCACCAGGTTCTGCCTTCGAGATATGGTCCGAGTTTAAATCTCTGCTGGAAAATCCATGGCATAACTCTTCCTTTGAAGGCTCTGGTTTTGTGAGACTGTTTCTTCCAACAAACTTGGATAACCAGGACTTCTTTTCACATGATTGGATTAAGGAGTGTCTAGACCAGTGGGCCTCAATACCAAATTGCCAGTTTTGGAACAGTCAATGGGCAGCTGTTATAGCTCGTGTTATTAAAAACTACAACTTCATTGACTGGGAGTGTTTCTTACCCGTGCTTTTCACTAGATACTTAAACATGTTTGAGGTTCCTGTGGCAAATGGAAATGGATCATATCCTTTTTCTGTGGATGTTCCAAGAAATACGAGGTTCTTGTTTTCAAATAAAGCTGTCACCCCAGCAAAGGCCATTGCGAAATCAGTTGTGTATCTCTTAAAAGTTGGTAGTTCAGCACAAGAGCACTTTGAGAAATTGGTCAACCTCTTAGAACAATATTACCATCCCTCTAATGGGGGTCGCTGGACATATTCCTTGGAGCGGTTTTTACTCTATTTGGTAATTACATTCCAGAAACGTCTACAGTATGAACAACAGGACATTGATAACAATAGGCAGGCTGAATTGTATCTAGGAAGATCAGAAAGGATGTCTTTTGTCAATGTGGTGCTGAAGTTAATTGACCGTGGTCAGTACAGCAAAAATGAACATCTTTCTGAGACAGTTGCTGCAGCAACTTCTATTTTGTCTTATGTTGAGCCCTCATTGGTTCTTCCATTTTTAGCTTCTCGATTCCATCTGGCCTTGGAGACGATGACAGCCACTCACCAGTTGAAAACTGCTGTGACATCTGTAGCATTTGCTGGGCGATCGCTGTTTCTGACATCCTTATCAACTTCTGCAAAATCGGATGATCTTGCTGGTGCTGATGTGTTCATTGATCTTCTATCAATTTCATTATCCAATGCATTACTTGGTATGGATGCCAATGATCCTCCTAAAACCTTGGCGACCATGCAGTTAATTGGTTCCATATTTTCCAATATGGCTACACTGGAAGACAATACAGAAGAGTGTTCATTCATGCCAAGTATCTGTTTTTCTGAGTGGCTTGATGAGTTCTTATGTCGGCTATTTTCCTTACTTCTACACTTGGAACCTAGCAGTGTTCTGAATGAAGGCCTTCATTCATCAGCAACATCAGGAACTTTTCTGGTTGAGGATGGCCCTTATTACTTTTGTATGCTGGAAATCTTGCTTGGGAGACTTTCAAAGTCACTGTATAACCAGGCTTTGAAGAAAATTTCCAAGTTTGTCAGGACAAATATTCTTCCTGGGGCCATTGCAGAGGTTGGACTGCTTTGTTGTGCATGTGTTCATTCAAATCCAGAAGAAGCAGTTGTTAGCCTTATTGAACCTATTCTATCATCTGTTATATCCTCTTTAAAAGGAACTCCTGTGACGGGGTTTGGAGGAAGTGGAATTTCTGATCCCTCAGTTTCAGCCAAGGCAAAACCCACAATTTCCCCAGCTCTTGAAACAGCAATTGATTATCAATTGAAAATACTATCAGTTGCCATCAGTTATGGAGGTCCTGCACTTCTTCGTTATAGGGATCAATTTAAAGAAGCCATCATTTCTGCCTTTGAATCCCCCTCATGGAAGGTTAATGGAGCTGGTGATCATGTCCTTCGTTCCCTTCTTGGAAGCCTGGTTCTTTATTATCCTATTGATCAGTACAAGTGTATTTTGCATCATCCTGATGCTGCTGGACTCGAGGAATGGATCAGCACAAAAGATTATGTAAATGATGAACCGTTGATTGGCCCAAAGTGGCATGTGCCTAGTAAAGAAGAAGTTCATTTTGCAAATGAACTTTTAAACTTGCATTTTCAATCAGCTTTAGATGATCTTTTGAGAGTATGCCAAACTAAAATGCACTCTGATCCAGGAATTGAGAAAGAGCACTTGAAAGTGACTCTGTTGCGTGTTGATTCTTCATTGCAAGGTGTTTTGTCATGCTTGCCTGATTTTAGACCATCCAGGAATGGGATGGTTGAAGATCAGGGTCATATTTCTTTCTTAATAGCTGGGTCAACGGGTTCGAGTGTTGGCAGCACTGAACTGCGGGAAAAGGCTGCTGAGATCATCCACACAGCCTGCAAATATTTAATAGAGGAGAAATCGGATGACAGCATTTTATTGATACTTATTATTCGTATAATGGATGCTTTAGGAAACTATGGCAATTTAGAATATGATGAGTGGTCACATCACAGACAAGCTTGGAAATTGGAATCTGCTGCCATTATAGAACCTCCGATAAATTTTATCGTGTCATCTCATTCTAAAGGAAAGAGAAGGCCTAGGTGGGCACTTACCGACAAGGCATACATGCATAGTACATGGAGATCATCACAGTCATCATATCATCTATACCGTACGAGTGGGAATATATCTCCATCAGACCATGCAATTCTTTTAATGGATGATCTCCTAAATCTCTCTTTACATAGATATGAAACTGTTCGAGGACTTGCTGGAAAAGCTCTCTTGAAGATGATTAAGCGATGGCCATCTATGATTTCGAAGTGTGTGCTCACTCTTACTGAAAACATACGAAACCCCAATTCACCAGAATATGCGGTCCTAGGTTCTTGTGCTGTACTTGCTACGCAAACTGTTCTGAAACATTTGACTATGGACCCAAAGGCATTCTCATCTTTTCTCCTTGGGATTCTTTCAAGCTCTCATCATGAATCACTGAAAGCTCAAAAGGCGATAAATGAGCTTTTTGTCAAATACAACATCCACTTTGCGGGAGTATCTAGAAGCATTTTCAAAACATTGGACAATCATTCAGATGGGCCTGATTTTACGAATCTGGTTTCTCAGATTGGTTCTATGAGTTTTGATTCTACTGGTTTGCATTGGCGGTATAATCTGATGGCTAATAGAGTTCTACTATTGTTGGCTATGGCATTGAGGAATGATCCACATTTCTCACCAAGCATTTTGAGTGAAACTGCTGGTCATTTCTTAAAGAACTTAAAAAGTCAACTTCCTCAGACAAGAATACTTGCAATCTCAGCCCTAAATACATTATTGAAAGAATCACCTTATAAGCTGTCAGCCGAGGAAAAGGCCAAAGAAAGTCCCAAATCCTCCCTTGAAGGAGCTTTAAGCCAAATATTTCAGGAAGAGGGATTTTTTAATGAGACTTTGAATAGTCTTTCACATGTTCATATCATCTCTGATACTGAAAGTGCATCTTCAAGAGGAAATCATGGAAATTCTTCCTTTCAGAGCCTAGCAGACAAATCAATCAGCCGTTTCTATTTTGACTTTTCGGCTTCATGGCCACGGACTCCTAGTTGGATCTCTTTATTAGGAAGTGATACTTTTTACTCGAGCTTTGCACGGATTTTTAAACGATTAACACAAGAATGTGGTATGTCTGTATTGCTGGCGCTCAAAAGTACATTGGAGGAGTTTGCAAATGCTAAGGAGAGGTCTAAACAGTGTGTTGCTGCTGAAGCATTCGCTGGAGTATTACATTCTGATGTCAATGGTCTTTTAGGTGCATGGGACAGCTGGATGATGGTCCAATTGCAGAATATCATACTAGCACCAACAGTGGAATCCATACCTGAGTGGGCTGCCTGTATACGCTATGCTGTTACAGGCAAGGGAAAGTATGGCACAAAAGTTCCTCTTCTGAGGCAAAAAATTTTGGATTGCCTGGTAACACCTTTACCTCATATGGTGACTACCACTGTAGTTGCCAAGCGCTATGCTTTTCTTTCTGCTGCACTCATAGAAGTGTCTCCACAAAAAATGCCAGTGACTGAAATACAGCTCCATAACAAACTACTCAAGGAGTTGCTGGCTAATATGAGTCACTCATCTGCCCAAGTAAGGGAAGCTATTGGTGTTACCCTTTCTGTGTTATGCTCTAACATTCGGCTTTATAGATCCTTTGCTCATAATTATTCACACGAAGGGTTAGATAGTGATGTGGTGAACCAAGTTAAAGGAGAAAGTTGGGTTCAATTTTTAACAGAACAAGCATTGGAATTGGTTATGAACATTCAGAAAACTAGTCAGTCTGACAATTTGGAGATTCCGACAGATTCAATTCCTGAAAATGGGCTTTCAAATGGGAACTCACAGGATGACATTAAATGGATGGAAACGTTATTCCATTTTATTATCTCGTCTCTGAAGTCTGGAAGATCTTCATATTTGCTGGATGTAATTGTGGGTCTTCTTTATCCTGTAATTTCCTTGCAGGAAACATCAAATAAAGATTTGTCAACATTGGCCAAGGCAGCTTTTGAATTACTAAAGTGGAGGATTTTTTGGGAACCCCATCTCCAGAAGGCTGTATCTGTGATTCTTTCTTCAGCCAATGACTTTAACTGGAGGACTAGATCTGCAACTCTTACATATCTTCGGACTTTTATGTACAGGCACACTTTCATTCTCTCAAGGGTGGAGAAACAACAAATATGGAAAACGGTCGAGGAGCTACTGATTGACAATCAAGTGGAGGTAAGAGAGCATGCGGCAGCAGTTCTAGCAGGTTTGTTGAAGGGTGGGGATGAAGATCTAGCTAGAGATTTTCGTGATAGAGCTTACATGGAGGCAAAGAATATCCAGAGGAAGCGAAAACAGAGAAATTTGAATCCTGGTCAGTCCATAGCTTCTATACATGGTGCTGTACTTGCTTTGGCAGCTTCAGTCTTATCAGTTCCTTATGACATGCCCAGTTGGTTGCCCGAACATGTTACTTTACTGGCTCATTTTGTTAGAGAGCCATCACCTGTGAAATCTACTGTTACAAAAGCAGTTGCAGAGTTCCGTCGGACCCATGCTGATACTTGGAATGTTCAGAAAGATTCATTTTCTGAAGAGCAGCTTGAGGTTCTGGCTGATACATCTTCATCATCTTCATATTTTGCTTGA 5427 0.4129 MHLYNAWLPPPVAEATKGEKEAFGRVVAAVKEAWRPEDPESVYSTLKWISVIDLFIKAKSEVCLEDVGALTEIGLELFHKSHNKLYAQVRWGNILVRLLNKYRKKLALKVQWRPFYDTLIQTHFTRNTGPEGWRLRQRHFETVTSLVRSCRRFFPPGSAFEIWSEFKSLLENPWHNSSFEGSGFVRLFLPTNLDNQDFFSHDWIKECLDQWASIPNCQFWNSQWAAVIARVIKNYNFIDWECFLPVLFTRYLNMFEVPVANGNGSYPFSVDVPRNTRFLFSNKAVTPAKAIAKSVVYLLKVGSSAQEHFEKLVNLLEQYYHPSNGGRWTYSLERFLLYLVITFQKRLQYEQQDIDNNRQAELYLGRSERMSFVNVVLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFLASRFHLALETMTATHQLKTAVTSVAFAGRSLFLTSLSTSAKSDDLAGADVFIDLLSISLSNALLGMDANDPPKTLATMQLIGSIFSNMATLEDNTEECSFMPSICFSEWLDEFLCRLFSLLLHLEPSSVLNEGLHSSATSGTFLVEDGPYYFCMLEILLGRLSKSLYNQALKKISKFVRTNILPGAIAEVGLLCCACVHSNPEEAVVSLIEPILSSVISSLKGTPVTGFGGSGISDPSVSAKAKPTISPALETAIDYQLKILSVAISYGGPALLRYRDQFKEAIISAFESPSWKVNGAGDHVLRSLLGSLVLYYPIDQYKCILHHPDAAGLEEWISTKDYVNDEPLIGPKWHVPSKEEVHFANELLNLHFQSALDDLLRVCQTKMHSDPGIEKEHLKVTLLRVDSSLQGVLSCLPDFRPSRNGMVEDQGHISFLIAGSTGSSVGSTELREKAAEIIHTACKYLIEEKSDDSILLILIIRIMDALGNYGNLEYDEWSHHRQAWKLESAAIIEPPINFIVSSHSKGKRRPRWALTDKAYMHSTWRSSQSSYHLYRTSGNISPSDHAILLMDDLLNLSLHRYETVRGLAGKALLKMIKRWPSMISKCVLTLTENIRNPNSPEYAVLGSCAVLATQTVLKHLTMDPKAFSSFLLGILSSSHHESLKAQKAINELFVKYNIHFAGVSRSIFKTLDNHSDGPDFTNLVSQIGSMSFDSTGLHWRYNLMANRVLLLLAMALRNDPHFSPSILSETAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSAEEKAKESPKSSLEGALSQIFQEEGFFNETLNSLSHVHIISDTESASSRGNHGNSSFQSLADKSISRFYFDFSASWPRTPSWISLLGSDTFYSSFARIFKRLTQECGMSVLLALKSTLEEFANAKERSKQCVAAEAFAGVLHSDVNGLLGAWDSWMMVQLQNIILAPTVESIPEWAACIRYAVTGKGKYGTKVPLLRQKILDCLVTPLPHMVTTTVVAKRYAFLSAALIEVSPQKMPVTEIQLHNKLLKELLANMSHSSAQVREAIGVTLSVLCSNIRLYRSFAHNYSHEGLDSDVVNQVKGESWVQFLTEQALELVMNIQKTSQSDNLEIPTDSIPENGLSNGNSQDDIKWMETLFHFIISSLKSGRSSYLLDVIVGLLYPVISLQETSNKDLSTLAKAAFELLKWRIFWEPHLQKAVSVILSSANDFNWRTRSATLTYLRTFMYRHTFILSRVEKQQIWKTVEELLIDNQVEVREHAAAVLAGLLKGGDEDLARDFRDRAYMEAKNIQRKRKQRNLNPGQSIASIHGAVLALAASVLSVPYDMPSWLPEHVTLLAHFVREPSPVKSTVTKAVAEFRRTHADTWNVQKDSFSEEQLEVLADTSSSSSYFA* 1809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0847 1808 Gene3D - 965 1210 IPR011989 -
Vvi19g0847 1808 Gene3D - 1290 1711 IPR011989 -
Vvi19g0847 1808 Pfam Domain of unknown function (DUF3437) 1723 1808 IPR021843 -
Vvi19g0847 1808 Pfam Proteasome-substrate-size regulator, mid region 310 503 IPR032430 -
Vvi19g0847 1808 Pfam Proteasome-substrate-size regulator, mid region 519 824 IPR032430 -
Vvi19g0847 1808 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 2 1808 IPR035309 GO:0016504|GO:0070577|GO:0070628
Vvi19g0847 1808 SUPERFAMILY ARM repeat 859 1762 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0847 K06699 - vvi:100263530 3556.92