Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0841 ATGTCTTCCGGCAGGTACATGGCTTACTCTCCTTCTCCCTCTACCGCTCCCCACTCCCCGCACATCGCCGGCCTCCGCTCCGCCACCTCTGCTCTTGTAGAGCAAGAGAAATATCTTTCTGAGTTACTGGCAGAGCGGCACAAGCTAAGTCCATTTATGCCTGTCCTCCCACATAGCTACCGGTTGTTGAACCAGGAAATATTGCGTGTAACCACACTGTTGGGGAATGCATCAATTTTAGATCAAAGTGGGCTTGAACATGCTAGCCCCCTCGCTTCTGGAGGAATATTTTCAAATGGAGGAGCCAATGTGAACGGATGGGCATCACCATTTCAATCAGAAATGTCAGGTTTATCAGCAGCACAAAACTGGCTAGGTTCTCAAGGTAGCTCATCTGGTCTTATTGTGAAGAGAACAATCAGGGTGGATATTCCTGTTGAGAAATTTCCTAGTTACAACTTTGTTGGGCGTCTCCTTGGTCCTAGGGGAAACTCTCTAAAGAGGATGGAAGCAACTACTGAGTGTCGTGTTTTAATCAGAGGTCGTGGCAGCATCAAGGACCCGGCTAGGAAATGA 576 0.4844 MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSYRLLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWASPFQSEMSGLSAAQNWLGSQGSSSGLIVKRTIRVDIPVEKFPSYNFVGRLLGPRGNSLKRMEATTECRVLIRGRGSIKDPARK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0841 191 MobiDBLite consensus disorder prediction 1 21 - -
Vvi19g0841 191 Pfam Homodimerisation region of STAR domain protein 36 74 IPR032377 -
Vvi19g0841 191 Gene3D K Homology domain, type 1 30 191 IPR036612 GO:0003723
Vvi19g0841 191 PANTHER RNA-BINDING PROTEIN RELATED 3 190 IPR045071 -
Vvi19g0841 191 MobiDBLite consensus disorder prediction 1 17 - -
Vvi19g0841 191 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 141 188 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0841 Vvi-Chr19 9377907 9383906 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0841 K14945 - vvi:100246386 371.703