Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g0829 | ATGGAAGCTTCTTCACTTCAAGCGGTAGTTCAGTTTCCACACCTGTTCAAATCGCCCAGTTGTATGCAGAATGAGCGTCCCATGAACACTGGAGCTAGGAAGTTGCATGGCAAATTCCCTTCTCTAACAGACACAAGAGTTCCAAGGAGGTTATTTTTGCAGTTTATGGGATACAATCATTTGTTATCATATGCTTGTCCTGTTCTTGCTGCCCCGATGCTGGAAATGACGGAACCTGAAGTAATTCGGACACAGAAGCTTGCCAATGGAGTGAGGTTTCAAGATGTGGTTGAAGGGGATGGACCAGAGGCGCAAGAAGGAGATTTGGTTGAAGTTAATTATGTATGCCGGCGGTCAAATGGGTATTTTGTTCATAGTACTGTGGATCAATTCAGTGGAGAAAGCATGCCTGTTGTACTTCCTCTGGATGAAAACCAGATTATAAAGGGCCTAAAGGATGTCTTGGTTGGAATGAAGGTTGGAGGAAAGAGGAGAGCATTGATACCTCCTTCAGTGGGATACATAAACGAAAACTTAAAACCAATACCAGATGAGTTTGGGCCTCGGCGGAGTCTTTTCTCCCATGCAAAGGAGCCTTTGGTATTTGAAGTGCAGCTCTTGAAAGTACTATGA | 633 | 0.4423 | MEASSLQAVVQFPHLFKSPSCMQNERPMNTGARKLHGKFPSLTDTRVPRRLFLQFMGYNHLLSYACPVLAAPMLEMTEPEVIRTQKLANGVRFQDVVEGDGPEAQEGDLVEVNYVCRRSNGYFVHSTVDQFSGESMPVVLPLDENQIIKGLKDVLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLFSHAKEPLVFEVQLLKVL* | 211 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g0829 | 210 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 80 | 209 | - | - | |
| Vvi19g0829 | 210 | SUPERFAMILY | FKBP-like | 77 | 209 | - | - | |
| Vvi19g0829 | 210 | Gene3D | - | 73 | 210 | IPR046357 | GO:0003755 | |
| Vvi19g0829 | 210 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 107 | 210 | IPR001179 | GO:0003755 | |
| Vvi19g0829 | 210 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 101 | 207 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi19g0829 | Vvi-Chr19 | 9168929 | 9178217 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi19g0829 | - | - | vri:117908563 | 420.624 |