Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0825 ATGGAAATGACCTTTCTGATGAATTCACTTTCAAGCCTGGGCTCCATGCTGAGGAAGATGTGGACATGGACGTGGACATGGAAGTTGATGACACTGTTCCTTCAAGCAACGCAGCAGCCCAAAATCCATTGGGTACTGAATATTTTCCTCCACAGGAGCAATCTATTCAGCCAAATCTGCCTGTGGAATACTCATCCTTGGCTTCAGAGGATGGGTTTACTATTCCACCTCCTCCTGACAGCCGAAGCTGTTCCTTATACAGGGCAATATAATCTATCCTACCCAGATTCTAACTTCGACTATTATGGGCACACTGTTGCTGAAGTTCCAAGCAGTAGCTTTTATGGACTTGCTGAAGGACATCAAGTGGCAATGCCCCATCCACCAGTGTACTATGACACAGTTCCTAATGTGTATCTGGAGAATGCCCTAGTCATGGTTAACCCTGTTGAGCCTGGAGCATATTATGGAGTTCAGGATGGCATGGTGCCTCCTGTTGCTGTAGTGAGTAGTGTAGAATCTTCTGGGCTTCACAGTGGATCTGGTCCAGTGAGTTACGACACCCTTGCTTCTGATCAAACTGGTACCTCTGAGCAAACTGGTGCCACTGATGCTCCAGCTGAAGTGGGCTGCAGTTCTTTATCAAACAGGAAGGTTGATGTTCCAGCTGTTGGTTGTCATGCTGAAATGGCCTCTGCAGAGGTTGCTTTTAGTTCAGCCACAATTCAAGCACCAGCAACCATTTTGGTAAAAGAGAGTGCTCCTGTGCCGTCAACCAATGTGGTAACTGGTGCTCCTGCATCAACAGGTTCTAAGGCTCAATCTAAAGCTTCACGGACTGAAAAGCGGACCATAGGCATGACATCCTCATTGAGGTCTAATAAGAAAGTTTCCAGTTTGGTGGACAAGTGGAAGGCTGCAAAAGAGGAATTGCATGAGGATGAGGAATCTGAACCTGAAAACGGTTTTGAGATTTTAGAGAAGAAGCGGCAAAGGGCAATAGAGGAATGGCGTGCCCAGCAAATTGCCAGTGGGGAGGCTAAAGATAATGCTAATTTTCAGCCCTTGGGCGGTGATTGGCGTGAGAGGGTTAGGCGCAAGCGAGCTCGAAAGTCTAGTGAAGCTAAGAAGTCTTCACCTGAGCCAACCGCTTACAAAAGCCAGCAGCCTGATTTAGTGGAGCTGTCAAGAGATCTTCCGTCTGGATGGCAGGCGTATTGGGATGAATCCACAAAACTGGTCTACTATGGAAATGCGGTCACATCGGAGACGACCTGGACCAGACCTACAAATTGA 1296 0.4753 MEMTFLMNSLSSLGSMLRKMWTWTWTWKLMTLFLQATQQPKIHWVLNIFLHRSNLFSQICLWNTHPWLQRMGLLFHLLLTAEAVPYTGQYNLSYPDSNFDYYGHTVAEVPSSSFYGLAEGHQVAMPHPPVYYDTVPNVYLENALVMVNPVEPGAYYGVQDGMVPPVAVVSSVESSGLHSGSGPVSYDTLASDQTGTSEQTGATDAPAEVGCSSLSNRKVDVPAVGCHAEMASAEVAFSSATIQAPATILVKESAPVPSTNVVTGAPASTGSKAQSKASRTEKRTIGMTSSLRSNKKVSSLVDKWKAAKEELHEDEESEPENGFEILEKKRQRAIEEWRAQQIASGEAKDNANFQPLGGDWRERVRRKRARKSSEAKKSSPEPTAYKSQQPDLVELSRDLPSGWQAYWDESTKLVYYGNAVTSETTWTRPTN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0825 431 SMART ww_5 398 431 IPR001202 GO:0005515
Vvi19g0825 431 CDD WW 400 430 IPR001202 GO:0005515
Vvi19g0825 431 ProSiteProfiles WW/rsp5/WWP domain profile. 397 431 IPR001202 GO:0005515
Vvi19g0825 431 MobiDBLite consensus disorder prediction 174 209 - -
Vvi19g0825 431 ProSitePatterns WW/rsp5/WWP domain signature. 403 429 IPR001202 GO:0005515
Vvi19g0825 431 PANTHER OS06G0298400 PROTEIN 83 431 - -
Vvi19g0825 431 SUPERFAMILY WW domain 398 430 IPR036020 GO:0005515
Vvi19g0825 431 Gene3D - 394 431 - -
Vvi19g0825 431 MobiDBLite consensus disorder prediction 261 292 - -
Vvi19g0825 431 MobiDBLite consensus disorder prediction 174 203 - -
Vvi19g0825 431 Pfam WW domain 399 429 IPR001202 GO:0005515
Vvi19g0825 431 MobiDBLite consensus disorder prediction 343 393 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0825 K24774 - vvi:100249836 652.129