Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0820 ATGAGCGAGACGAAGTCCAAATTCTTGGAGGTGTACTCCGTTTTGAAGTCGGAGCTTCTCAATGACCCCGCTTTTGAGTTCACTGACGATTCTCGCCAATGGGTCGAGCGTATGTTGGACTACAATGTACCTGGAGGAAAGCTAAATCGAGGGCTCTCTGTTGTTGACAGCTACAAGTTGCTGCAAGGCAGGCAACTGACTGATGACGAAGTTTTTCTTGCATGTGTCCTGGGTTGGTGCATTGAATGGCTTCAAGCATATTTCCTTGTGCTTGATGATATTATGGATAACTCGCATACACGTCGAGGTCAACCTTGCTGGTTCAGGGTTCCCAAGGTTGGTATGATTGCTGCGAATGATGGGGTGATTCTTCGCAATCAAATCCCTAGAATTCTCAAGAACCATTTCAAAGGAAAGCCATATTATGTGGATCTTCTGGATTTGTTTAATGAGGTGGAATTTCAGACAGCCTCAGGACAGATGATAGATTTGATCACGACTATTGAAGGAGAGAAAGATCTATCAAAGTATTCATTGCCTCTTCACCGCCGCATTGTTCAGTACAAAACTGCTTATTACTCATTTTACCTTCCAGTTGCATGTGCATTGCTTATGGCAGGCGAAAATTTGGACAATCACACTTCTGTAAAGGACATTCTTGTTCAAATGGGAATCTATTTTCAAGTACAGGATGATTATCTGGATTGTTTCGGTGACCCCCAAGTGATTGGTAAGATCGGAACGGATATTGAAGATTTTAAGTGCTCTTGGTTGGTTGTGAAAGCACTAGAGATTTGTAATGAGGAACAGAAAAAAACCTTATATGGAAACTATGGGAAAGCAGATCCAGCCAATGTTGCAAAAGTGAAGGCACTTTATAAAGACCTCGATCTTCAGGGTGTGTTTCTGGAGTATGAGAGCAAAAGTTATGAGACGTTAGTGAGCTCCATCGAAGCTCATCCAAGTAAGGCAGTACAAGCAGTGCTGAAATCGTTCTTGGGGAAGATTTACAAGAGACAGAAGTAG 1026 0.4259 MSETKSKFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGDPQVIGKIGTDIEDFKCSWLVVKALEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQGVFLEYESKSYETLVSSIEAHPSKAVQAVLKSFLGKIYKRQK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0820 341 ProSitePatterns Polyprenyl synthases signature 1. 89 103 IPR033749 -
Vvi19g0820 341 CDD Trans_IPPS_HT 30 339 IPR000092 GO:0008299
Vvi19g0820 341 SFLD Isoprenoid Synthase Type I 6 339 - -
Vvi19g0820 341 Gene3D Farnesyl Diphosphate Synthase 1 340 IPR008949 -
Vvi19g0820 341 SUPERFAMILY Terpenoid synthases 7 340 IPR008949 -
Vvi19g0820 341 FunFam Farnesyl pyrophosphate synthase 1 340 - -
Vvi19g0820 341 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 2 341 IPR039702 GO:0008299|GO:0016765
Vvi19g0820 341 Pfam Polyprenyl synthetase 33 295 IPR000092 GO:0008299
Vvi19g0820 341 ProSitePatterns Polyprenyl synthases signature 2. 223 235 IPR033749 -
Vvi19g0820 341 SFLD Polyprenyl Transferase Like 6 339 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0820 K00787 - vvi:100232975 686.026