Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0816 ATGGAGCTGGTTCCGTACTCAGACCCCAACTCCAGTTCCGACCCCAGTACCCTCCCATGGCAAGACATGTTCCGATCTGCCTCTATCCGCAAACCAGACCCCTCTCCTCAGAACCACGCGCCCCCTCCTCCGGCCCACGCGTCGCCGCCTGCTCCTCCTCCGGACCCGGCAGCCTCGAGCCCGGATCAGCGCAGCCTCACCGGGGATTCCCAGGTGCGCCTCGCTATCTACATAGCTATGGCTCATGCTGGGCTGGCCTTAACCATATTCATACTCTACGCCGTGGGTAAACTTCTTGAAGCTTATCTCAGGCCAATTCAATGGGCTGTTCTCTGTTCGATCCCTCTCAGAGGCATTCAACAGACGCTTGTGGGGTTTTGGTCCGAGCCCTTGAGCTTGGGTCTCACAGAGACCGTGTTGGCAGTTCCCGTAGCGATATTTCGGGTTTTTGTGGGTACTCTTGTTGAAATTCGTGATGTTTGTCTCCGGGTTCTTCGTGGGAAGCCCAAGACGGAAGAGTTGAGGCGAAATCGAAGTGGGTTTTCCAAGTTGGTTCGGTGGCTTGTGTCTTTTTGGCTTTTCGTGATCCTTTATGAGAGTATTGGGGGTGTTGGATCTTTTACACTTCTTGGATTATGCCTCATGTTTGGGTCTAGGAATGTTGATTCAACCATGTCTAAAGTATCCAGTTTAAGGAGTGTTAGCTTTCGTAGAAGTGAAATTAGCGCGTTTTTCACCAGAGGGATACTGAAAAAATTGAAAACCATTGTGGCAATTGGGTTGATCTTTGGTATGATTGTGGGGTTCTTGGTGGGAATAATGTTTTTCTCGTATAAGATTGGAGTTGAGGGGAAGGATGCAGTGATTTCAGTGAAATCTCATGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGATTTCAGTGAAATCTCATGTGGAAGAGAGCAATTATGCAGAGAGGATTGGTGTTAAGAAGTGGATGGAAGACAATGATGTGACTGGGATGGTGGATAGGTACTCAAACAAGTTCTATGAGACTGTTTGGGAGCAGATTGATGGTCTGGCTATGCAGTACAATATGACTGAGTTTGTTGTGGGGATTAAGCATTTTGTTGTAACACAACCCCCTGCTAATTCTTCAGAGCAATCCACTGCTTTGGTTGCCCCATCACCTTATGCCGAGAAATTTTTGAGTTTGCGGAATCGGGTTAGCAAGAAGGAATGGGGACAGATTTATACAGAGTTGGATGCAATATTTCGAGAATTATTGATCACTAGGGCGGATTTGGCTGAGAAGGCTAAAGGATTTGCAGTTCAAGGGATGGATGTGGCTCAGCGTTTGTTTGACAGTTACAAATCTGTTCTAGGCGGTGGTATGAAATTCATGGTTTCCATTGGTGAATCCATTATATCCGGGGCGGCTGAGGTTTTCAATTTTGTGTCGCAATCAGCAGTTTTCTTCTGGGTTTTGTACTATCTGATCACATCAGAGTCTGGTGGGGTTACTGAACAAGCGATGAGTTTGATCCCAATGCCCAAATTGTACAGAGACCGGTGTGTTGCGGTTCTTGATAATGCTATTTCAGGTGTTCTTTTGGCCACAGCTGAGATTGCCTTCTTTCAGGGATGTCTCACATGGCTTTTGTTTAGGCTATACTCAATACACTTCTTGTACATGTCAACCATACTTGCAATAATCAGTCCTCTGCTGCCGATCTTTCCAAGCTGGGTTGCCACTATCCCAGCAACTATACAATTGGTACTGGAAAGTAGATACATATTGGCCATCACTTTGTCAGTTATTCATCTTGCACTTATGGAATATGGTGCATCCGAAATTCAGGAGGATATACCTGGCTATAGTGCATATCTTACCGGGCTTAGCATCATTGGTGGAATGACATTGTTCCCATCTGCCCTAGAGGGAGCAATAATGGGCCCGTTGATAACTACTGTGGTGATTGGGCTCAAGGAGTTGTATACAGAATTTGTTCTGGATGGACCAAAGCAAGGTGAGGAGGAGTAG 2100 0.4438 MELVPYSDPNSSSDPSTLPWQDMFRSASIRKPDPSPQNHAPPPPAHASPPAPPPDPAASSPDQRSLTGDSQVRLAIYIAMAHAGLALTIFILYAVGKLLEAYLRPIQWAVLCSIPLRGIQQTLVGFWSEPLSLGLTETVLAVPVAIFRVFVGTLVEIRDVCLRVLRGKPKTEELRRNRSGFSKLVRWLVSFWLFVILYESIGGVGSFTLLGLCLMFGSRNVDSTMSKVSSLRSVSFRRSEISAFFTRGILKKLKTIVAIGLIFGMIVGFLVGIMFFSYKIGVEGKDAVISVKSHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISVKSHVEESNYAERIGVKKWMEDNDVTGMVDRYSNKFYETVWEQIDGLAMQYNMTEFVVGIKHFVVTQPPANSSEQSTALVAPSPYAEKFLSLRNRVSKKEWGQIYTELDAIFRELLITRADLAEKAKGFAVQGMDVAQRLFDSYKSVLGGGMKFMVSIGESIISGAAEVFNFVSQSAVFFWVLYYLITSESGGVTEQAMSLIPMPKLYRDRCVAVLDNAISGVLLATAEIAFFQGCLTWLLFRLYSIHFLYMSTILAIISPLLPIFPSWVATIPATIQLVLESRYILAITLSVIHLALMEYGASEIQEDIPGYSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIGLKELYTEFVLDGPKQGEEE* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0816 699 Pfam AI-2E family transporter 486 627 IPR002549 -
Vvi19g0816 699 MobiDBLite consensus disorder prediction 1 23 - -
Vvi19g0816 699 MobiDBLite consensus disorder prediction 35 59 - -
Vvi19g0816 699 MobiDBLite consensus disorder prediction 1 65 - -
Vvi19g0816 699 Coils Coil 295 295 - -
Vvi19g0816 699 PANTHER TRANSMEMBRANE PROTEIN 63 695 IPR002549 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0816 Vvi-Chr19 9068174 9071471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0816 - - vvi:100265288 1178.7