Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0812 ATGGGCGATGGAGGAGGAGGTGGAGGCGAAGATACCTCTAGTAGGGTTCTGATTCCGAAAGATGCAAGGAAGATGGTCCAAGATATTAAGGAGATCGCACGAAAGCATAGTGATGAGGATGTGTACGCAATGCTTCAGGAGTGCGCTATGGATCCTAATGAAGCTGTGCAGAGACTTCTCTATTTAGATACATTTCATGAGGTCAAGAAGAAACGTGATCGGAAAAAAGAGAGCTCAAACAACAGGGCATCTGAATCTGATAGGCGGAGATCAGGCATTCAAGGGCGAGGTGCTTGGACTGGTCGAGGGAACTATTCTTCTCATAACTTCTCTCATGACGCTGGTTTTGGGAGAAATGCTGCTCAAAAGGAAAATGGAGTCCATCCCAGGACAGCAAGAGGTTTTACACACTCTTCTTTACCACTTTCACGGAGAGCTCAAAATAATGCAACACCACCCAATGTGCCAAAATCTTCAACTGTCTCATCCAATGGTGCCTCAAGTGTTTCTAATGGAAGTTCTAATCATGTACTCGTTCCTGGATTGGCTGCTGGTGATGTTAACACTATCCCTAAAGATAATTCAGTTGCGATCATTAATAAATCTGGCAATGGACCGTCTGTGCTAATTAGTGGTGTGGAATGCCCTCCTGGTACCATGCCCAAGCATTCTTTTGCATCTGTAGTTGGAGTGAAGCAGGGAAGCTCTAATTCAACTTCTCATACGACTCCAACATCTGTATCAGGTGTTTATTCTTCTGCTTCAGATTCTGTACTGGTGCCATCTCCCAGTTCCTGTCTCCCTGATACTATGGGTACGATTAAGCATGAAGTGAGTCAAAGCGCAGGTGTTGAAACTAATCAGCTACCTGAACTTTCAGAATCCTTATCTTTGTCAACCCATGACGATTCTTTGATTATTGACTCTTCTTCTACTCATGAGAGCCAGTCATCACTGCAGTTTACTGGTCCATCAAAAGCTCCAGATTCAGAAACAGAGGTTGCAACTATGATAGCTGAAGATAATTCTCAGTTGATAACTGAGTCAAATGTTTCGGTTTTGGAAGAAGCTACTTCAAACCTGCACATCTCTGATGCTCGTCATGTCATCTTCAGAAACCATCTTCAAATCCCTGAAGCTTTAAAAAATGGTTTGGTTTTTGGAAGTTTCGATTCTAGTTTTTCACTAGGCTCGAAATATGCTAATGGTCCTGATGTTGAAAAGAGCCCTACACCAGCAGAATCTTCTCAGGAGAATATTGAAATTACTAAGGGGCCTTCTCCAAGCAATCAAAGTGTAGCCTCAACTGCACAAGAGGAAGATTATCCTGATCAACCTCAATCTCCTCCACATGCACCAGAAAATTTATCACCTCCAGTGGGCAGTGTCTCATCTGGTGCAGTTCCAAAGCATGATCAATCGAAGCAGGAGATGCTGTTGCCTACAGGAGGCCCTCATTTCCCTGTTGTTCAGCCTCTCCCAAACTATAGTTTTGGTTTCATGCCACCCATGCTAGGGAGCTCGCTTGTTCAATTTGAAGGACCTGATGCTCAGGCACAGGACAATTCTCACTCCCCAAATATTGTAAGGGGAAATTCTTTGGTCCTGTCAGCACCCAGTCCGACTCCACCTGCAACTCAACCTGCAGGTATCATGCAGACCTCCATTCCGGTCTCTCCACAGTCAGTTCCTGTTTTCCGACCACCTTATCCTCCAAACTATTTCCCATATAGCAACTACTATCCCCCATTCTATGTGCCACCAGCTATCCACCAATTTTTAAGCCACACTGGGTTTCCTCAACAACCTCCAACTGGAAATGTATATGTACCAACAGCAGCAACTGCTGCAGGAGTCAAATTGTCTCATCCACAATACAAGCCGGGGAATAACACTGGAAATTCAGGTCACATTGGAATTTTGCCTGGTTATGGTTCATACAGCACATCCCAAGTTGGTTACAGTCCCAGTTCAGCTGTGAATGCTGGAAGCTCTACCGCCAATGTGGATCTTGCAGCATCACAGTTGAAGGAAAACAATATCTACACAAACAGACAACAGAGTGAAGGTTCGGCTGTCTGGATTCCTGCTCCAGGCCATGATATATCCAGCTTGCAGTCCAATTCTTTGTTCAACCTTTCCACGCAGGGGCAGCATCCCACTTTTTCACCTGCACAGGCTGGTCATGGTGCCTTCACTGGAATGTATCACCCAACACAGACCATGGCTGCTCCCCCAACCGTTCACTCTCTTCTACAACAGTCTCAGTCTATGGCTGGATCTGTGGATATGATGGGGCCTCCAGGTAGTGGTTACCAGCCGCCTCAACATGCACAGATCAACTGGAATCCTAATTATTGA 2361 0.4536 MGDGGGGGGEDTSSRVLIPKDARKMVQDIKEIARKHSDEDVYAMLQECAMDPNEAVQRLLYLDTFHEVKKKRDRKKESSNNRASESDRRRSGIQGRGAWTGRGNYSSHNFSHDAGFGRNAAQKENGVHPRTARGFTHSSLPLSRRAQNNATPPNVPKSSTVSSNGASSVSNGSSNHVLVPGLAAGDVNTIPKDNSVAIINKSGNGPSVLISGVECPPGTMPKHSFASVVGVKQGSSNSTSHTTPTSVSGVYSSASDSVLVPSPSSCLPDTMGTIKHEVSQSAGVETNQLPELSESLSLSTHDDSLIIDSSSTHESQSSLQFTGPSKAPDSETEVATMIAEDNSQLITESNVSVLEEATSNLHISDARHVIFRNHLQIPEALKNGLVFGSFDSSFSLGSKYANGPDVEKSPTPAESSQENIEITKGPSPSNQSVASTAQEEDYPDQPQSPPHAPENLSPPVGSVSSGAVPKHDQSKQEMLLPTGGPHFPVVQPLPNYSFGFMPPMLGSSLVQFEGPDAQAQDNSHSPNIVRGNSLVLSAPSPTPPATQPAGIMQTSIPVSPQSVPVFRPPYPPNYFPYSNYYPPFYVPPAIHQFLSHTGFPQQPPTGNVYVPTAATAAGVKLSHPQYKPGNNTGNSGHIGILPGYGSYSTSQVGYSPSSAVNAGSSTANVDLAASQLKENNIYTNRQQSEGSAVWIPAPGHDISSLQSNSLFNLSTQGQHPTFSPAQAGHGAFTGMYHPTQTMAAPPTVHSLLQQSQSMAGSVDMMGPPGSGYQPPQHAQINWNPNY* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0812 786 MobiDBLite consensus disorder prediction 136 172 - -
Vvi19g0812 786 MobiDBLite consensus disorder prediction 310 329 - -
Vvi19g0812 786 MobiDBLite consensus disorder prediction 401 483 - -
Vvi19g0812 786 MobiDBLite consensus disorder prediction 409 443 - -
Vvi19g0812 786 MobiDBLite consensus disorder prediction 69 92 - -
Vvi19g0812 786 MobiDBLite consensus disorder prediction 69 172 - -
Vvi19g0812 786 Pfam GBF-interacting protein 1 N-terminal 18 77 IPR009719 -
Vvi19g0812 786 MobiDBLite consensus disorder prediction 310 331 - -
Vvi19g0812 786 SUPERFAMILY UBA-like 18 81 IPR009060 GO:0005515
Vvi19g0812 786 PANTHER FLOCCULATION PROTEIN (DUF1296) 9 529 IPR044277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0812 Vvi-Chr19 9040260 9050334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0812 - - vvi:100258374 1426.77