Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0807 ATGACATTGGTTGGAACTGTGATTGCTTCAAGCATCTACTTTGGGACAGCATGGTGGCTTCTTACAAGTGTGGAGTATATCTGCGATCCAGCCTTGCTTCCAGAAGGAAGTCCATGGACATGCCCTGGTGATAACGTTTTCTACAGTGCTTCAATCATATGGGGAGTTGTGGGTCCACTCAGAATGTTTGCGAGGTTGGGAGTCTACCCAGAGATGAATTGGTTTTTCCTTGCTGGCTTCCTTGCCCCTGTTCCATTATGGTTCCTTTCACGCAAGTTCCCCAACCAAAAATGGATCAGGCTCATCCACATGCCCATTATCATAAAAGCTACAGGAAACATGCCACCAGCTAGAGCTGTGCACTTTGTGATGTGGGGAATAGTGGGAGTTTTCTTCAACTTCTATGTTCACAACAGGTACAGGCAGTGGTGGGCCAAGCACACCTATATCTTATCAGCAGCTTTGGATGCTGGGGTTGCCTTTATGGGAATCATCATTTTCTTTACCCTTCAATCTAAAGATATTTTAGGGGTGGGCTGGTGGGGGTTGGAAGCAGAAGACCATTGCCCACTGGCTTCATGCCCTAGAGCACCGAGGGTTGTGGCTGAAGGTTGTCCATCTTTTGAGGAATAG 633 0.4739 MTLVGTVIASSIYFGTAWWLLTSVEYICDPALLPEGSPWTCPGDNVFYSASIIWGVVGPLRMFARLGVYPEMNWFFLAGFLAPVPLWFLSRKFPNQKWIRLIHMPIIIKATGNMPPARAVHFVMWGIVGVFFNFYVHNRYRQWWAKHTYILSAALDAGVAFMGIIIFFTLQSKDILGVGWWGLEAEDHCPLASCPRAPRVVAEGCPSFEE* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0807 210 Pfam OPT oligopeptide transporter protein 2 169 IPR004813 GO:0035673
Vvi19g0807 210 PANTHER ISP4 LIKE PROTEIN 3 206 IPR004648 GO:0055085
Vvi19g0807 210 NCBIfam OPT family oligopeptide transporter 3 171 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0807 Vvi-Chr19 9002001 9003082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0807 1 208 Organic Solute Cotransporters AT5G55930 63.462 4.73e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0807 - - vri:117908160 434.491