Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0806 ATGTTTGCCAACTCTGGATCGGGTGGTGTTTATGCAGTTGGTATCCTTACAATTGTCAAGGCATTCTACAAAAGGAGTCTCAGCCCAGGAGCAGGATACTTGCTAGTACAAACCACTCAGTTGCTTGGCTATGGATGGGCTGGCCTGTTCAGAAAATACCTAGTGGACTCCCCCTATATGTGGTGGCCATCAAATCTAGTCCAAGTCTCTCTCTTCAGGGCATTGCATGAAAAAGAAAAAAGAAGCAAAGGAGGACTCACTAGGCTGCAATTCTTTCTCATTGTGTTCATTTCAAGCTTTGCCTACTACCTGGTCCCAAACTACTTGTTTCCTTCCATCGGTACCGTCTCCATTATTTGTTTGATTTGGAAGAACTCAATCACTGCCCAACAGATTGGTTCAGGCCTCTATGGCATGGGCCTTGGATCATTCGGCCTCGACTGGGCCACAGTTGCTAGTTTCTTAGGAAGTCCCTTAGCCACTCCTGGCTTTGCCATCATTAATATTCTTGTTGGGTTTTTCATAATTGTCTATATTTTGCTCCCCCTTACCTATTACAATAATGCATATGAAGCTAAGAAATTCCCTATATTCTCATCTCACACCTTCGATTCAACTGGTCAGCCATACAATCTCACCAGAATTTTGAACCCAAAAACTTTCTCAGTCGACCTAGCTGAATACAATGCTTATAGCAAACTTTATCTTAGTGTCTTCTTTTCAGTCACATATGGGATTTCTTTTGCAACTCTTGCAGCTTCTGTCTCACATGTTGCACTCTTCAATGGAAGTACTATCTGGCAAATGTGGACTAAGACGAGGGCAGCAGCAGGAGAGAAGTTTGGAGACGTGCATACGAGACTGATGAAGAAGAACTATAAAATAGTCCCCCAATGGTGGTTTTATTTAATTTTGATTGTAGTGCTTGGTCTTTCACTCCTTGCCTGTGAAGGTTTCGACAAGCAGCTTCAACTACCATGGTGGGGAATTTTGCTATGTTGTGCCTTGGCATTCTTTTTCACCTTACCCATCGGCATAATAACGGCCACGACAAATCAGGCATGGTTGTTTTACATGGGGCTAAATGTGATCACAGAGCTGATTATTGGGTTCATATACCCAGGGAAGCCGCTTGCAAATGTGGTTTTCAAGACCTATGGCTATATCAGCATGTCGCAGGCACTCACATTTCTCAGTGATTTCAAATTAGGCCACTACATGAAGATCCCACCCCGATCCATGTTCCTCGTTCAGTTAGTTGGAACTGTGATTGCTTCAAGCGTCTACTTTGGGACAGCATGGTGGCTTCTTACAACCGTGAAGCATATATGCGATCGGGATTTGCTACCAGAAGGAAGTCCATGGACATGCCCTGGTGATGACGTTTTCTACAATGCTTCAGTCATATGGGGAGTTATTGGTCCACTCAGAATGTTCGGAAGGTTGGGGGTCTACCCAGAGATGAATTGGTTTTTCCTTGCTGGCTTTCTTGCCCCTGTTCCAGTATGGTTCCTTTCACGCAAATTCCCCAACCAAAAATGGATCAGGCTCATCCACATGCCCATTATCATAGGAGCTACAGGAAACATGCCACCAGCTAGAGCTGTGCACTTTGTGATGTGGGGAATTGTGGGAGTTTTCTTCAACTTCTATGTTTACAACAGGTACAAGCAGTGGTGGGCCAAGCACACCTACATCTTATCAGCAGCTTTAGATGCTGGGGTTGCCTTTATGGGAATCATCATTTTCTTTGCCCTTCAATCTAAAGATATTTTTGGTGTGGACTGGTGGGGTTTGGCAGCAGATGATCATTGCCCACTGGCTTCATGCCCTACAGCACCGGGGGTTGTGGCTGAAGGTTGTCCTCGTGTTTGA 1875 0.448 MFANSGSGGVYAVGILTIVKAFYKRSLSPGAGYLLVQTTQLLGYGWAGLFRKYLVDSPYMWWPSNLVQVSLFRALHEKEKRSKGGLTRLQFFLIVFISSFAYYLVPNYLFPSIGTVSIICLIWKNSITAQQIGSGLYGMGLGSFGLDWATVASFLGSPLATPGFAIINILVGFFIIVYILLPLTYYNNAYEAKKFPIFSSHTFDSTGQPYNLTRILNPKTFSVDLAEYNAYSKLYLSVFFSVTYGISFATLAASVSHVALFNGSTIWQMWTKTRAAAGEKFGDVHTRLMKKNYKIVPQWWFYLILIVVLGLSLLACEGFDKQLQLPWWGILLCCALAFFFTLPIGIITATTNQAWLFYMGLNVITELIIGFIYPGKPLANVVFKTYGYISMSQALTFLSDFKLGHYMKIPPRSMFLVQLVGTVIASSVYFGTAWWLLTTVKHICDRDLLPEGSPWTCPGDDVFYNASVIWGVIGPLRMFGRLGVYPEMNWFFLAGFLAPVPVWFLSRKFPNQKWIRLIHMPIIIGATGNMPPARAVHFVMWGIVGVFFNFYVYNRYKQWWAKHTYILSAALDAGVAFMGIIIFFALQSKDIFGVDWWGLAADDHCPLASCPTAPGVVAEGCPRV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0806 624 PANTHER ISP4 LIKE PROTEIN 1 622 IPR004648 GO:0055085
Vvi19g0806 624 NCBIfam small oligopeptide transporter, OPT family 4 590 IPR004648 GO:0055085
Vvi19g0806 624 Pfam OPT oligopeptide transporter protein 1 585 IPR004813 GO:0035673
Vvi19g0806 624 NCBIfam OPT family oligopeptide transporter 2 587 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0806 Vvi-Chr19 8994872 8997460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0806 1 622 Organic Solute Cotransporters AT5G55930 68.006 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0806 - - vvi:100256645 1263.83