Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0805 ATGGCAGAACTTCAGGATGAAGTCACCCAGAAGAACTTCAAAGTTGATGGGGATGAAGAGGAAAACGATTGTCCCATAGAGCAAGTGAGGCTCACAGTTCCAATCACAGATGATCCAACAGAACCTGTTCTGACATTCAGGACATGGGTGCTTGGTGTAGCAGCCTGTGTGATTCTGTCCTTTGTGAACCAATTCTTTGGCTATCGCAGTAATCAACTCAGCATTTCATCAGTCTCAGCACAGATAGTTACCCTGCCACTAGGGAAGTTCATGGCTGCAACACTCCCAGAGAAACCGATCAAAGTCCCATGCACAAAGTGGTCGTTTTCCCTGAATCCGGGGCCTTTTAATATCAAGGAGCATGTGTTGATCACCATGTTTGCCAACTCTGGATCGGGTGGTGTTTATGCAGTTGGTATCCTTACAATTGTCAAGGCATTCTACAAAAGGAGTCTCAGCCCAGGAGCAGGATACTTGCTAGTACAAACCACTCAGTTGCTTGGCTATGGATGGGCTGGCCTGTTCAGAAAATACCTAGTGGACTCCCCCTATATGTGGTGGCCATCAAATCTAGTCCAAGTCTCTCTCTTCAGGGCATTGCATGAAAAAGAAAAAAGAAGCAAAGGAGGAGTCACTAGGCTGCAATTCTTTCTCATTGTGTTCATTTCAAGCTTTGCCTACTACCTGGTCCCAAACTACTTGTTTCCTTCCATCAGTACCGTCTCCATTATTTGTTTGATTTGGAAGAACTCAATCACTGCCCAACAGATTGGTTCAGGCCTCTATGGCATGGGCCTTGGATCATTCGGCCTCGACTGGGCCACAGTTGCTAGTTTCTTAGGAAGTCCCTTAGCCACTCCTGGCTTTGCCATCATTAATATTCTTGTTGGGTTTTTCATAATTGTCTATATTTTGCTCCCCCTTACCTATTACAATAATGCATATGATGCTAAGAAATTCCCTATATTCTCATCTCACACCTTCGATTCAACTGGTCAGCCATACAATCTCACCAGAATTTTGGACCCAAAAACTTTCTCAATCAACCTAGATGAATACAATGCTTATAGCAAACTTTATCTTAGTGTCTTCTTTTCAGTCACATATGGGATTTCTTTTGCAACTCTAGCAGCTGCTGTCTCACATGTTGCACTCTTCAATGGAAGTACTATCTGGCAAATGTGGAGTAAGACGAGGGCAGCAGCAGGAGAGAAGTTTGGAGACGTGCATACGAGACTGATGAAGAAGAACTATAAAATAGTCCCCCAATGGTGGTTTCATTTAATTTTGATTGTAGTGCTTGGTCTTTCACTCCTTGCCTGTGAAGGTTTCGACAAGCAGCTTCAACTACCATGGTGGGGAATTTTGCTATGTTGTGCCTTGGCATTATTTTTCACCTTACCCATCGGGATAATAACGGCCACGACAAATCAGCAACCAGGGCTAAATGTGATCACAGAGCTGATTATTGGGTTCATGTACCCAGGGAAACCGCTTGCAAATGTGGTTTTCAAGACCTATGGCTATATCAGCATGGTGCAGGCACTCACATTTCTCAGTGATTTCAAATTAGGTCACTACATGAAGATCCCACCCCGATCCATGTTCCTCGTTCAGTTAGTTGGAACCGTGATTGCTTCAAGCGTCTACTTTGGGACAGCATGGTGGCTTCTTACAACCGTGGAGCATATATGCGATCTGGATTTGCTACCAGAAGGAAGTCCATGGACATGCCCTGGTGATGACGTTTTCTACAATGCTTCAGTCATATGGGGAGTTATTGGTCCACTCAGAATGTTCGGAAGGTTGGGGGTCTACCCAGAGATGAATTGGTTTTTCCTTGCGGGCCTTCTTGCCCCTGTTCCAGTATGGTTCCTTTCACGCAAATTCCCCAACCAAAAATGGATCAGGCTCATCCACATGCCCATTATCATAGGAGCTACAGGAAACATGCCACCAGCTAGAGCTGTGCACTTTGTGATGTGGGGAATTGTGGGAGTTTTCTTCAACTTCTATGTTTACAACAGGTACAGGCAGTGGTGGGCCAAGCACACCTACATCTTATCAGCAGCTTTAGATGCCGGGGTTGCCTTTATGGGAATCATCATTTTCTTTGCCCTTCAATCTAAAGATATTTTTGGTGTGGACTGGTGGGGTTTGGCAGCAGACGATCATTGCCCACTGGCTTCATGCCCTACAGCACCGGGGGTTGTGGCTGAAGGTTGTCCTACTATTTGA 2238 0.4522 MAELQDEVTQKNFKVDGDEEENDCPIEQVRLTVPITDDPTEPVLTFRTWVLGVAACVILSFVNQFFGYRSNQLSISSVSAQIVTLPLGKFMAATLPEKPIKVPCTKWSFSLNPGPFNIKEHVLITMFANSGSGGVYAVGILTIVKAFYKRSLSPGAGYLLVQTTQLLGYGWAGLFRKYLVDSPYMWWPSNLVQVSLFRALHEKEKRSKGGVTRLQFFLIVFISSFAYYLVPNYLFPSISTVSIICLIWKNSITAQQIGSGLYGMGLGSFGLDWATVASFLGSPLATPGFAIINILVGFFIIVYILLPLTYYNNAYDAKKFPIFSSHTFDSTGQPYNLTRILDPKTFSINLDEYNAYSKLYLSVFFSVTYGISFATLAAAVSHVALFNGSTIWQMWSKTRAAAGEKFGDVHTRLMKKNYKIVPQWWFHLILIVVLGLSLLACEGFDKQLQLPWWGILLCCALALFFTLPIGIITATTNQQPGLNVITELIIGFMYPGKPLANVVFKTYGYISMVQALTFLSDFKLGHYMKIPPRSMFLVQLVGTVIASSVYFGTAWWLLTTVEHICDLDLLPEGSPWTCPGDDVFYNASVIWGVIGPLRMFGRLGVYPEMNWFFLAGLLAPVPVWFLSRKFPNQKWIRLIHMPIIIGATGNMPPARAVHFVMWGIVGVFFNFYVYNRYRQWWAKHTYILSAALDAGVAFMGIIIFFALQSKDIFGVDWWGLAADDHCPLASCPTAPGVVAEGCPTI* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0805 745 NCBIfam small oligopeptide transporter, OPT family 21 711 IPR004648 GO:0055085
Vvi19g0805 745 PANTHER ISP4 LIKE PROTEIN 17 743 IPR004648 GO:0055085
Vvi19g0805 745 Pfam OPT oligopeptide transporter protein 44 706 IPR004813 GO:0035673
Vvi19g0805 745 NCBIfam OPT family oligopeptide transporter 28 708 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0805 Vvi-Chr19 8962812 8965954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0805 22 743 Organic Solute Cotransporters AT5G55930 70.083 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0805 - - vvi:100249762 1525.76