Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0804 ATGGCGGAATTTGAAGGTGATGCTGCTCATTCTGAGTTCTCCAAGAAGAAAGACATCGATGTCGATATTGCGGGGGAAAAAGAGGTCAATGACTGTCCTATTGAGGAAGTGAGGCTCACTGTTCCAATCACTGACGATCCGACGGAGCCGTGTCTGACTTTCAGGACATGGGTGCTCGGCCTAATATCATGTGTGCTTCTAGCCTTTGTGAATCAGTTCTTTGGGTACCGGGATAATCAGCTATCCATTTCATCGGTTTCAGCACAGATAGTTGTTCTCCCCTTGGGAAAGCTTATGGCTACAATGCTACCGACGAAACAGGTCAACGTCCCATTCACAAACTGGTCATTTTCGCTTAATCCAGGGCCATTTAGCTTGAAGGAACATGTGTTGATCACCATGTTTGCCAATGCTGGAAGCGGTGGTGTTTATGCAGTATATATAATTACAATTGTCAAGGCATTCTACCATAGGAACCTCAATCCAGTAGCAGGCTATTTGCTATTACAAACTACTCAGTTGCTTGGCTATGGGTGGGCTGGTCTCTTCAGAAAATATCTGGTGGATTCCCCTTATATGTGGACATTGCATGAACCAGAAAAGAGATCAAGAGGAGGAGTCACAAGGCTGCAGTTCTTTCTCATTGTGTTCATTTCAAGCTTTGCCTACTACCTGGTCCCAAGCTACTTGTTTCCTTCCATTACTACCGTCTCCTTCATTTGTTTGATTTGGAAGAAATCCATCACTGCCCAACAGATTGGTTCAGGCCTCTCTGGGTTGGGCCTTGGATCATTCGGCCTTGACTGGACCACAGTTGCAAGCTTCTTAGGAAGTCCTTTAGCCACCCCTGCTTTCGCCATCATTAATGTCCTGATCGGGTTTTTCTTAATTGTCTATGTTATGCTCCCCATTGCTTATTGGACTAATTTATATGATGCTAAGAAATTTCCAATCATCTCCTCTCATGTGTTCGATTCAACCGGTCAGCCATATAATCTTACCAGAATTTTGGATAGTCGCACTTTCCAGATCGATCAAGCTGGATATAATGGTTACGGCAAAATTTATCTGAGTGTCTTCTTTGCATTCACATATGGCATTAGTTTTGCAGCTCTAACAGCTGCTATTTCGCATGTTGCCCTCTTCAATGGGAAAACCATTATGCAAATGTGGAGAAAAACAAGGTCTGCGGTAGGAGATCAGTTTGGAGACGTGCACACAAGACTGATGAAGAAGAACTATGAAGCAGTCCCCCAATGCTTTTGCCTTGGCACTATTTTTCACCTTACCCATTGGGATAATAACGGCCACGACAAACCAGGCATAACACTCGGGCTGAATGTGATCACAGAGTTGGTCATTGGGTACATATATCCAGGGAAGCCTCTTGCTAATGTGTCTTTCAAGACGTATGGCTACATCAGTATGGTGCAAGCACTCACATTTCTTGGAGACTTCAAACTAGGCCACTACATGAAGATCCCTCCCAAATCCATGTTTGTTGTTCAGTTAGTGGGAACCATTGTTGCTTCAAGCGTCTACTTTGGGACAGCATGGTGGCTACTTGAAAGTGTTCGCAACATCTGTGACCGAGCTTTGCTGCCAGAGGGAAGCCCTTGGACATGCCCTGGCGATGACGTTTTCTACAATGCTTCAATCATATGGGGAGTTGTGGGTCCACTCAGAATGTTTGCGAAGTTGGGCGTCTACCCAGGGTTGAATTGGTTTTTCCTTGTTGGCTTACTTGCTCCTGTTCCAGTATGGTTGCTGTCACGCAAATTCCCCAACCAAAAATGGATCAAGCTCATCCACATGCCCATTATTATAGGAGCTACAGGAAATATGCCACCAGCTAGAGCTGTGAACTATGTGATGTGGGGAGCAGTGGGACTTTTCTTCAATTTATATGTTTACAGAAGGTACAAGCAATGGTGGGCGAAGCACACCTATGTCTTATCAGCGGCTTTGGATGCTGGAGTTGCCCTTATGGGAATACTCATTTTCTTTGCCCTTCAGTCCAAAGATATTTTTGGTGTGGACTGGTGGGGTCTGGAAGCAGATGATCATTGCCCACTGGCTTCATGCCCTACAGCACCAGGGATAGTAGCTGAAGGTTGTCCTGCTATATGA 2130 0.4516 MAEFEGDAAHSEFSKKKDIDVDIAGEKEVNDCPIEEVRLTVPITDDPTEPCLTFRTWVLGLISCVLLAFVNQFFGYRDNQLSISSVSAQIVVLPLGKLMATMLPTKQVNVPFTNWSFSLNPGPFSLKEHVLITMFANAGSGGVYAVYIITIVKAFYHRNLNPVAGYLLLQTTQLLGYGWAGLFRKYLVDSPYMWTLHEPEKRSRGGVTRLQFFLIVFISSFAYYLVPSYLFPSITTVSFICLIWKKSITAQQIGSGLSGLGLGSFGLDWTTVASFLGSPLATPAFAIINVLIGFFLIVYVMLPIAYWTNLYDAKKFPIISSHVFDSTGQPYNLTRILDSRTFQIDQAGYNGYGKIYLSVFFAFTYGISFAALTAAISHVALFNGKTIMQMWRKTRSAVGDQFGDVHTRLMKKNYEAVPQCFCLGTIFHLTHWDNNGHDKPGITLGLNVITELVIGYIYPGKPLANVSFKTYGYISMVQALTFLGDFKLGHYMKIPPKSMFVVQLVGTIVASSVYFGTAWWLLESVRNICDRALLPEGSPWTCPGDDVFYNASIIWGVVGPLRMFAKLGVYPGLNWFFLVGLLAPVPVWLLSRKFPNQKWIKLIHMPIIIGATGNMPPARAVNYVMWGAVGLFFNLYVYRRYKQWWAKHTYVLSAALDAGVALMGILIFFALQSKDIFGVDWWGLEADDHCPLASCPTAPGIVAEGCPAI* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0804 709 PANTHER ISP4 LIKE PROTEIN 26 422 IPR004648 GO:0055085
Vvi19g0804 709 NCBIfam OPT family oligopeptide transporter 35 425 IPR004813 GO:0035673
Vvi19g0804 709 NCBIfam OPT family oligopeptide transporter 442 672 IPR004813 GO:0035673
Vvi19g0804 709 Pfam OPT oligopeptide transporter protein 51 425 IPR004813 GO:0035673
Vvi19g0804 709 Pfam OPT oligopeptide transporter protein 443 670 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0804 Vvi-Chr19 8952168 8955081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0804 30 707 Organic Solute Cotransporters AT5G55930 63.850 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0804 - - vvi:100254893 1365.52