Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0803 ATGGGTGTCACGAATACTGTGGTCTGTAACTACGATGGAAAAGAGCTGCCCAAGGTATTGGGTCACAATACAGTTGATAGAGTGTTATTGGATGCCCCTTGCAGCGGGACTGGGGTTATATCAAAAGATGAATCCGTCAAAACTTCTAAAAGCTTGGAAGATATACAGAAATGTGCTCATTTACAGAAGCAACTAATACTTGCTGCCATTGACATGGTGGATGCCAATTCAAAATCTGGGGGATATATTGTCTATTCCACGTGCTCGATAATGATTCCTGAGAATGAAGCAGTTATAGATTATGCACTGAAGAAGAGGAATGTAAAACTTGTACCATGTGGACTTGATTTTGGGCGTCCTGGGTTTACACGGTTTAGGGAACATCGGTTTCATCAATCATTAGAAAAGACTAGGCGTTTCTATCCCCATGTTCACAACATGGATGGATTTTTTGTGGCAAAGTTGAAGAAAATGAGCAACTCTAAGCCAAATCCAACACCGTCAGAACCATCAGAAGTGGAGGAGCAAGCTCCTGAGGAAAATGACAGTGACAGCGAATTGAACATGGGAGAAAAAACTCAACAGCATCCGGGTAAAAGAGGGACAAAAAAGGAAAAAACTCAACAGCATCCGGGTAAAAGAGGGACAAAAAAGGAAAATGGGGGTTTGAAGAATGCAGCTCCTGAAAATGGGAAAAAAGAATCCCCATCCACCACCACAAAGAGGAAGAAGAGGAAATTCCCTTCCAGAGAAGAAATCTCAAAAGCCAGGTAA 774 0.4212 MGVTNTVVCNYDGKELPKVLGHNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFGRPGFTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAPEENDSDSELNMGEKTQQHPGKRGTKKEKTQQHPGKRGTKKENGGLKNAAPENGKKESPSTTTKRKKRKFPSREEISKAR* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0803 257 Gene3D Vaccinia Virus protein VP39 1 251 IPR029063 -
Vvi19g0803 257 MobiDBLite consensus disorder prediction 158 257 - -
Vvi19g0803 257 Pfam 16S rRNA methyltransferase RsmB/F 1 156 IPR001678 GO:0008168
Vvi19g0803 257 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 157 IPR029063 -
Vvi19g0803 257 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 1 158 IPR001678 GO:0008168
Vvi19g0803 257 PRINTS RNA (C5-cytosine) methyltransferase signature 80 96 IPR023267 GO:0001510
Vvi19g0803 257 PRINTS RNA (C5-cytosine) methyltransferase signature 26 38 IPR023267 GO:0001510
Vvi19g0803 257 PRINTS RNA (C5-cytosine) methyltransferase signature 140 157 IPR023267 GO:0001510
Vvi19g0803 257 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 161 IPR023267 GO:0001510
Vvi19g0803 257 ProSitePatterns NOL1/NOP2/sun family signature. 25 36 IPR018314 GO:0003723|GO:0008168
Vvi19g0803 257 MobiDBLite consensus disorder prediction 196 220 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0803 K14835 - vvi:100265196 497.278