Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0795 ATGGCAAGTAACAGAGACGATCCTCTCACATTTATAAACCCATCGTCCTCTCCAATCACAGTCTCTTCAGCAGAGGGAGATAGCTTTCTCTTAGAACCCGCTTCCCAAATCGGGAGCGCTTCTGGAAGCTTTCAGAACGAGGGTTTGCTCTCCGGCGGCGACGGCACCAGCGACGCTGAGTTCGGTTTCTCCCGCCCCGATTTCCGCCAGAGTCCACTCGCCGGCACCGTCCAGTTGTACGACCGCCATGTGTTCCTCTGCTACAAGCACCCTCAGGTCTGGCCTCCCAGGATTGAGGCTGCAGAGTTCGATCGCCTTCCGAGACTTCTCTCCGCTGCTCTCATGGCCAGGAAGAGTGAGATGAAGAAACAGACCCGCTTAACAATATGTGAAGGACATGATGGAACTGAGACATCAAATGGAGATGTATTAATATTTCCAGACATGATCAGATACAGGAGATTGACGCATTTTGATGTTGACACATTTGTTGAAGAAGTGCTCGTGAAGGATGGTGAGTGGCAGCCTGTAACTCCTGAAAAACTAATTGGGTCATGCATTTTTGTTTGTTCTCATGGGTCACGGGATCGCCGTTGTGGTGTATGTGGACCCGCTGTTGTTGCTAGGTTCAAAGAAGAGATAGAATCGCATGGCCTTCAAGGTAAAGTGTCTGTGAGCCCATGCTCACACATTGGAGGCCATAAATATGCAGGAAATGTGATCATATTTGGATCAAATATTGATGGAAAAGTCAGTGGGCACTGGTATGGGTATGTTACTCCAGATGATGTACCTATTTTGCTTGAGCAGCATATTGAGAAGGGAGAAATTGTCTATGGACTGTGGAGGGGTCAGATGGGTTTATCCGAAGAAGAACAGACGAAATCCCAAGAGCTAAGGGTCCAATTAAATGGTGGGACAGGTGATGGAAAGCCCACAAAGGAGACTCTGCAAACACAAACAAATGAAATGGATACTGCTGCATGTGGATCTCAAATCGAGGTTATGGCCTGCTGCCAAGAAAACGGAAACTCTTCCTGTTGCCAGAACCCTGTGTTGTCAGGAAAGATGGAAAAACTATTTGAGAGGGAGGCAAAAGTTACACCTGAAAAGAAGAAAAGTAGCAAAATGACTATTTCCAGGAGTAGTAGTAACAAAAGTGCTTGCACACGAAAAGTATGTGCAATGCCTACATGGTTTGAGAGCTGGGAGCGTGAAGATACATATGCTGCTCTTGCTGTTGTTTGTGCTGCAGTCTCAGTTGCCATCGCCTGTCACTGCTACAAACAGTTGACGTAA 1299 0.4719 MASNRDDPLTFINPSSSPITVSSAEGDSFLLEPASQIGSASGSFQNEGLLSGGDGTSDAEFGFSRPDFRQSPLAGTVQLYDRHVFLCYKHPQVWPPRIEAAEFDRLPRLLSAALMARKSEMKKQTRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWQPVTPEKLIGSCIFVCSHGSRDRRCGVCGPAVVARFKEEIESHGLQGKVSVSPCSHIGGHKYAGNVIIFGSNIDGKVSGHWYGYVTPDDVPILLEQHIEKGEIVYGLWRGQMGLSEEEQTKSQELRVQLNGGTGDGKPTKETLQTQTNEMDTAACGSQIEVMACCQENGNSSCCQNPVLSGKMEKLFEREAKVTPEKKKSSKMTISRSSSNKSACTRKVCAMPTWFESWEREDTYAALAVVCAAVSVAIACHCYKQLT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0795 432 Pfam Sucrase/ferredoxin-like 73 284 IPR009737 -
Vvi19g0795 432 Gene3D Glutaredoxin 185 283 - -
Vvi19g0795 432 Gene3D Glutaredoxin 81 180 - -
Vvi19g0795 432 MobiDBLite consensus disorder prediction 1 20 - -
Vvi19g0795 432 CDD TRX_Fd_Sucrase 187 286 IPR009737 -
Vvi19g0795 432 FunFam APD1p protein 184 283 - -
Vvi19g0795 432 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 38 419 IPR009737 -
Vvi19g0795 432 SUPERFAMILY Thioredoxin-like 186 288 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0795 Vvi-Chr19 8878338 8882810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0795 - - vvi:100258311 865.914