Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0791 ATGTTTGCAGCATCCATGTTTTTGGGGATATGCTTGATTTGGGCTTACAGGGTCATTCACATCCCTACGGAAGATGGAAGATGGGGTTGGATTGGATTGCTTTTGGCTGAGCTTTGGTTTGGCCTTTACTGGCTTGTCACTCAAGCTTCTCGCTGGAACCCCATCTATCGATCCACTTTCAAGGACAGGCTCTCACAAAGGTATGAAAAAGACCTCCCAGCTGTTGATATATTTGTGTGCACGGCAGACCCTGTGATAGAGCCACCAATAATGGTGGTCAACACTGTTTTATCAGTCATGGCGTACGATTATCCGCAGGAAAAACTTGGTGTATACCTATCTGATGATGCTGGTTCAGAGTTAACATTCTATGCTCTGTTAGAGGCTTCCCATTTCTCCAAGCACTGGATACCTTACTGCAAGAAGTTCAAAATCGAGCCAAGGTCGCCTGCAGTCTATTTTTCCTTGACATCTCACCTACATGATGCTGATCAGGCTAAAGAATTGGAGCTTATCCAGAAATTGTATGAAGAGATGAAGGACAGAATTGAAACTGCTACCAAGCTAGGTCGAATTCCTGAAGAAGTACTCATGGAGCAGAAAGGATTTTCTCAGTGGGATTCATTTTCTTCTCGGCATGACCATGATACCATCCTTCAAATACTAATTGATGGGAGAGACCCAAATGCCATGGATGTTGAAGGGAGCAAATTGCCAACTCTGGTATACTTGGCTCGTGAAAAGAGACCCAAACATCCCCACAACTTCAAGGCTGGAGCTATGAATGCATTGATAAGGGTGTCATCAAAAATTAGCAATGGAGCCATCATTCTCAACGTAGACTGCGATATGTACTCGAACAATTCACATTCCATCCGGGATGCTCTTTGCTTCTTCATGGATGAAGAGAAGGGTCAAGAGATTGCTTTTGTGCAATATCCACAGAACTTCCAAAACATCACTAAGAACGAATTATATAGTAGCTCATTAAGAGTTATTAGCGAGGTGGAATTTCATGGTTTGGATGGCTATGGAGGTCCTATGTATATTGGAACTGGCTGCTTTCATAGAAGGGATACTCTATGTGGGAGGAAGTTCAGCAAGGACTATAGGAATGAATGGAAGAGAGAAAGCATAAAGACAGAAGAAAGTGCACATGAGTTACAAGAAAGTCTAAAGAATCTAGCAAGCTGCAGATATGAAGGAGATACACAATGGGGAAATGAGATGGGGTTGAAGTATGGGTGCCCAGTTGAAGATGTGATAACAGGGCTGTCCATTCAATGCCTAGGATGGAAATCAGTGTATCTCAACCCTGCCCAGAAGGCTTTCCTTGGGGTTGCTCCCACGACACTGGAGCAGACTCTTGTGCAGCACAAGAGATGGTCTGAAGGTGATCTACAGATTCTGCTTTCCAAGTACAGTCCTGCATGGTATGGACTAGGAAGAATTAGCCCAGGCCTTATACTGGGTTATTGCACCTACTGCCTCTGGCCTCTCAACTCCTTGGCAACACTGTCCTATTGTATAGTCCCTTCCCTTTATCTTCTCCATGGCATTCCCTTGTTTCCACAGGTCTCAAGCCCATGGTTCCTACCATTTGCATACGTGATATTGGCCAAGTACAGTGGCAGCTTGGCTGAGTTCCTCTGGTCTGGAGGCACACTCTTGGGGTGGTGGAATGACCAGAGAATCTGGCTCTTTAAGAGAACAACCTCCTACCTCTTCGCCTTCATGGACACCATTCTGAGGCTACTGGGATTCTCTGAAACATCGTTTATACTGACAGCCAAAGTTGCTGATGAAGATGTGTCCCAGCGATATGAGGGAGAGATGATGGAGTTTGGAGGGTCTTCCCCCATGTTCACCATCTTAGCAACACTAGCAATGCTCAATCTGTTTTGTGTTGTTGGGGTGGTGAAGAAGGTGGGCTTGGATATGGAGGTCTACAAAACAATGGCTCTGCAGATTCTGCTAGCTGTGGTTCTGCTTCTCATCAACGGGCCTCTGTACCAAGGCCTCTTCCTGAGGAAGGATAATGGCAAGATGCCATGGTCACTCACTGTTAAATCAGTTCTTCTGGCCTTAGTTGCTTGTGCCTGTTCCACATACTTCCCCTTTCTTTTATCATAA 2133 0.4524 MFAASMFLGICLIWAYRVIHIPTEDGRWGWIGLLLAELWFGLYWLVTQASRWNPIYRSTFKDRLSQRYEKDLPAVDIFVCTADPVIEPPIMVVNTVLSVMAYDYPQEKLGVYLSDDAGSELTFYALLEASHFSKHWIPYCKKFKIEPRSPAVYFSLTSHLHDADQAKELELIQKLYEEMKDRIETATKLGRIPEEVLMEQKGFSQWDSFSSRHDHDTILQILIDGRDPNAMDVEGSKLPTLVYLAREKRPKHPHNFKAGAMNALIRVSSKISNGAIILNVDCDMYSNNSHSIRDALCFFMDEEKGQEIAFVQYPQNFQNITKNELYSSSLRVISEVEFHGLDGYGGPMYIGTGCFHRRDTLCGRKFSKDYRNEWKRESIKTEESAHELQESLKNLASCRYEGDTQWGNEMGLKYGCPVEDVITGLSIQCLGWKSVYLNPAQKAFLGVAPTTLEQTLVQHKRWSEGDLQILLSKYSPAWYGLGRISPGLILGYCTYCLWPLNSLATLSYCIVPSLYLLHGIPLFPQVSSPWFLPFAYVILAKYSGSLAEFLWSGGTLLGWWNDQRIWLFKRTTSYLFAFMDTILRLLGFSETSFILTAKVADEDVSQRYEGEMMEFGGSSPMFTILATLAMLNLFCVVGVVKKVGLDMEVYKTMALQILLAVVLLLINGPLYQGLFLRKDNGKMPWSLTVKSVLLALVACACSTYFPFLLS* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0791 710 FunFam Cellulose synthase-like protein E1 207 377 - -
Vvi19g0791 710 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 493 IPR029044 -
Vvi19g0791 710 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 691 - -
Vvi19g0791 710 FunFam Cellulose synthase isolog 65 162 - -
Vvi19g0791 710 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 211 373 IPR029044 -
Vvi19g0791 710 Pfam Cellulose synthase 383 697 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi19g0791 710 Pfam Cellulose synthase 75 370 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi19g0791 710 Coils Coil 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0791 Vvi-Chr19 8786823 8790381 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0791 2 705 Glycosyltransferase AT1G55850 60.931 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0791 - - vvi:100242996 1449.11