Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0782 ATGGCTTCCTCTGATGATTTCCTTTGTTATTTTGCAGAGTTAAAGAAAGAAGAGCTGATTTCAGGACTCTTGCTCCCACATCCACAACCTACAATGGTTCCTTATTACAATGGTCACTATTCTCTGTATAACAAGTCAGCTGTTACAGTAAATACTGGCGAGTTTTCTGATGGCTTACCCATGGAAACGCATGCTTCCAATAAAGGTTTTGATGCAGGAGAAAGGCAGACAGCTGTGCCCCAGTGCAACAATAATGAGACTGAAATTCCTGTAAGTGGTGTTCTTGAACCAGGTCCTAGTGCTACCTCTTCTCCAAATCAGATAGATGCAAGAATATCAAACATTTATTCAGAGCCAGATCAATCTCTTGCCAGAATCCAACGGTCCAAGTCACGGCAAAAGGCTTTAGAGTTTCGTAATAGTTCAAAAGTAAAATGTAAAAACCGTTTAGTTGATGACAACAACAATGGTACATATTCTAGTGGAGTTGCAGTCTCCAGAATGGCTTTCCAGCAGTCCAACTTTGTTAATGAGTTATTGGAGTCAGTCAAACCCTCTAATATCAACAATAAAAATACTGGTGAGAGAGAAGCAGGAAAAGGAGATCATTATAGCTTGGAAAAGGGTGGCAACATTTATTCTGGTAGAGTTACAAGATCTAGAAGTTCTTCTCAACAAACCAAGTGTGTGAATATGGATGGCTCTTCTCATGTTACCAAGGGAGATAGTGTCAGACTTGCACCATCTATTGGCAAACCTATGCAAGAGTCTGCCTATGCCAGTGCTTTGTTGGATCCTTCTAATATTGATGATAAAAGTCATGCATTAATAGAAGATAAAATGGGAGATCCCCACAGCAAGGGGAAGGGTAGCTATGTCTATTCTGGTAGAATCACAAGATCTAGAAGTTCTTCTGAAAAAGTTAACTCTGTAGATGAGTCTTCCAAACTGGATAGCTCTTCTAACATTGCTAGGGTTGATAGAGGTACACAGGCAGAGTCTATTCCTAATTCACTACAGTGGCCTAATCATGCTAATGAGTTTTTGGAATTGGTCAAACCTTTTGACATCAAAGGTCGAAGTTGTGAAGTCAAAGAAGTAACAAAAGTAGATATTCGGAGCAAGGAAAAGGGCAGTGGTGTTTATTGTGGAAGAATTACAAGATCTAGGAGTTCTTACCAACATCCCAACTGTCTGGGTGGGTTTTCTGAACTGGTTAGCTCTTCTAATATTGTCAATGAAGATGGTTGTAAACTTACTCAACCAATCAGTAAATTAATGGAACCATCTGAACCATTAAGATCAATTGGAGGAGATGCTGCTTCTCAGAATGCAGAAGGTACACAAATATCTCTTAGACGGTCCTCACCAAGACAGAAGGATTCAGAGTTACCTGCAGAAGATGCAAGAGAACATCCAGGCAAGGGAAATATTGCAGATGAGTGTGTTGGTAGAAGAACAAGGTCTACATCTTTTGCTTCTGGCAGGTCTGCCCTAGGAAATACATTAAACAGGTCAGAAGGATTAGAGCCTCTGAAAAGCTCAGGATCTGGCGCAAATATCCTGCCTTGTGCTGAAACCAATAACATTGCCAAGCAGGAAAGATGTGCTGCAACTGCTCCAGAGACTGAACTAGTTTCAGATGAGCCAGTAGACTCTCATCTTGTTTGTTCTGGATCTAATTTGGATGGTGCCAGCCTTAGAGTGGGGTTGGAAGTTTTAGTCTTGAGGCCACCCTCTGATCTTGATATGTTTGTGAAGCCCAAACAACTTGATTTTGATGATGTGGAAGATTGCAGTTTGAATGAAGCCTCTGTTCCTGCACCAATGAAGAAAAGACAGGACACTTCATCATCAGGAAAGAGATGTTCTACCCCTCTGGCGCCTGCAGAATCACTGGAAAGAGTGATATCTAATAACCATCATGGAAACAGTGTTCCACCTTTGAAGAAGTTGTTGTTGGAGGAGCTGGAAGTTTTGAGCAAGGAAGAGGAAGCTCGAACAGGTTCGTCTGAGTCTGATGCAGAGGAAAAAGTAGAAGTTGAAAAACAGAAACTTGGGTATGGTTTTTGCCATGCATTTTCTACGAGCAGAACTTCAAATAGATCAGCTGGGTCATCAATAAATAAAGCAGTGGAGGTGTACGAAACAGCAATCTCCCATACATTGCCAGAAGGCATTAAAATCTCAAAACTAGGCCATTCAGTTGTCTCAAAAGCTTTTAGAAAAAGTTCATGTGAAAGCCCGTTAAAAAATGCAGTGGATTCTGATTTGACCAATGTAGATGCAGATATAAGGATGAATTTATCTTTTGAGAAGGGGGTTGGGGAGTTTCATGTTGTTGGAGATGCTGAAATGGTATCAGAAGACAGAACCTTAGCCGTGTCTTTGCAAGACTCTGCTGTTAAGTTCCCTGCTGTTTCTGTGAATGAATCTAAGGGTTGCGCTGTGAGTCAGAACATGAAATCGGGCAACGTTCAATTTCAAAATGCAGAGAAAGTAACTCCTTCCTTGGGAAGCTGTAGTGGCAATGACAAGATTGTTGGTGACTCTAAACCAATTGAACTGCAAATTACAGAGAAGTCCATACAGTCAGGAAGAAGTTTCAACTTTACCATGGAGGGATTGCCTCAGGCTAAGAGGAGAAAGATTGAGGGTCAACTACTTGATGCCTCATCTGCTTCTCCAAATTCAAAAAGAGAGCCATTTCAGAGTATTCAAGACACAATGAGTACACACTTGAATGGTGTAGAAGGCAACTCAGAGACTGTTTTAATATCTCCATACCTCCATATTTCTTGTGAGGAAGGTGTGGATCAATCTAATGCCAGTAAAAGTCCTCATGAAGAAATGGATCAGAATATGAAGTGCTGCATGGAAGAAGGAATTAAATCTTCATCTAAACTACAAGTGATGGAGGCAGAACATAGCTTGGAAGGGAGAGATAAAAATGTTAAACCCTCCTTCACATTTGAAAGTGAACAATTAGGGCCACCCCTTGTCTCAAGTTTGACTAAGCGAGCATCAGGAGATTTCCAAGGTTTTTTGGTGGAGGAAGCAGAAGGGGAGGGTGGAACAAACATTATACATGATATGCGAAGCCAGTGTGCTACTGAAGAACACCAAGGTTCCTTGTTCCTTGATGATAAACTTGGTCCAGAGATTGCAGAAAATTTGACTTGTATGGATGAAAGAACTATGTGGAAAACTAATTTTCAACTGGAGGATGGTGGATTATTTTCACATTGTTCAATTGGTTCTCCACATAACCAATATCTGGATTTGTTTGGTGCTGATCAAGCTAAGCCCGTGTTTGAGGGCTTTGTTATGCAAGAAGAGAATGAAAAACCACATATTGCTAGAGATGGAATCGGTTTTGACAAATTGGACCTTCCAACCACTACAATCGAACGTGCCAGTGTTTTGGAGCAGCTTTGCCTATCTGCTAGCATTCATACCCCATTGCCACATTTCTCAATTACAGACAAGTTGCCCAGAGCACCAAACTTTTGCCAATCTGTACCTAATGGGCTTCTAGAGGGCATGGATCTGCAGAGCACCCTGTCTTTAAATGACGATGCTGGTAAGCTACTTAGGGCTAGTTACAGTTGCTTGAATGAGGAAGCCAATCATGCTTTTCAAGGGAGTTCCACTTCTGATCACCGACCATTTTCTAGCACTCAATTTGCTTGGAACATTAGCAAACCATGTATATCTCCAGTTGGGAAGCTTTGGAGGGTTAGCACATCAAGTTCTGGCAGTTCAGGGAAGCGACTGAGCTTGAATCCTGAGCTCACTTGCTACCCAATTGAGGAGGATCCCTGCATAAGTGAAGAAACTGAGCAAAAAGATGATGTCAGTGATGCCTTCCATGAAGGTATTAGTTCAATGACTATAACTGGTTCCGCCAGAAGAGAACTGCTTGGTGACATTACAGAAGAATATCTAAATCCACTGGCATCAGTTTCTACAGCTGAGAAATTTTCTGATAGGGGCAGTTTGGATTCAGTGAACATAGACATCAATGTCCCCAGGACTCAGAATAAAGGTAAAGAGAAGCTTCAGAACCTTTATGAAAGTAAGACAAGAGGTACAAACGAGATGAGGGAGAACCAGAGTTTATCAGTGGCTGAAAATGGTGTTAGGAGGGTCACTGAATCACTTCATAACAGGTTCAGTAAGCCAAAACTATCAGGAAAGACCAGTTTGAGAAAAGGAGGCCCAAGTATTTCAGAAAGGGAGTCCAAGCATAAGAATATTGTGTCCAACATCACTTCCTTTGTTCCACTTGTTCAACGAGCTCAAGGAGCTGCAGTTGTTACAGGGAAGAGAGATGTCAAGGTGAAAGCTCTGGAGGTTGCTGAGGCTGCAAAGCGCCTAGAGGAAAAAAGAGAAAATGAACGTAAAATGAAAAAGGAAGCCTTGAAACTTGAGCGTGCAAGACTAGAGCAAGAAAATTTGAGGCAGTTGGAGCTGAAGAAAAAAAAGAAAGAAGAGGAAAGGAGGAAAAAAGAAGCTGAGATGGCAGCAAGGAAAAGACTGAGGGAAGAAGAAGAAAAGGAGAAGGAAGCAAAAAGAAAGCGTACTGAAGAAGCACGGAGACAGCAAAGAGAGCATGAGCAGAAATTACGTGCTGAGAAAGAGAAGGAAAAGAGACATCGAGCCACAGTTGAAAAAGTGCATGAGAGGAAGGAAGCAAGAGATGAAGTGAAAATTGATAAGAAAGTGGAAGAAGACACTCTTGTGCAAAAACCAGAGACTGAGTTGAGAACTTCCAGGGTTTCAACAAGTGATATTTCTAAAGCAAGTATTGTTCTTAAAGATTCTGAGGCTCTTAGTGATTGTGGTGAGATTCAGAAGGTAACAGGTAATTTGGATAAAGCATCTGAAAATGATAATCTGGTTGCAAATACAACTAAAGAAGAGTCATATGAGATGTCTCCCTACCAATCCTCAGACGATGAAGAGGAAGAAGAGGATGACATACCAACCAAAAAGTTCATCCCATCATGGGCCAGTAAAAATTATCTGGTTATTGCCGTATCCTCCCAGCAAAAAGTAGACCCGAATATGATATTCCCACCAGAAAGCTTTTGTAGTATCAATGAAGTTCTTGTATCTCGAAAGCAGCAGCAGCAGAAATAG 5145 0.4136 MASSDDFLCYFAELKKEELISGLLLPHPQPTMVPYYNGHYSLYNKSAVTVNTGEFSDGLPMETHASNKGFDAGERQTAVPQCNNNETEIPVSGVLEPGPSATSSPNQIDARISNIYSEPDQSLARIQRSKSRQKALEFRNSSKVKCKNRLVDDNNNGTYSSGVAVSRMAFQQSNFVNELLESVKPSNINNKNTGEREAGKGDHYSLEKGGNIYSGRVTRSRSSSQQTKCVNMDGSSHVTKGDSVRLAPSIGKPMQESAYASALLDPSNIDDKSHALIEDKMGDPHSKGKGSYVYSGRITRSRSSSEKVNSVDESSKLDSSSNIARVDRGTQAESIPNSLQWPNHANEFLELVKPFDIKGRSCEVKEVTKVDIRSKEKGSGVYCGRITRSRSSYQHPNCLGGFSELVSSSNIVNEDGCKLTQPISKLMEPSEPLRSIGGDAASQNAEGTQISLRRSSPRQKDSELPAEDAREHPGKGNIADECVGRRTRSTSFASGRSALGNTLNRSEGLEPLKSSGSGANILPCAETNNIAKQERCAATAPETELVSDEPVDSHLVCSGSNLDGASLRVGLEVLVLRPPSDLDMFVKPKQLDFDDVEDCSLNEASVPAPMKKRQDTSSSGKRCSTPLAPAESLERVISNNHHGNSVPPLKKLLLEELEVLSKEEEARTGSSESDAEEKVEVEKQKLGYGFCHAFSTSRTSNRSAGSSINKAVEVYETAISHTLPEGIKISKLGHSVVSKAFRKSSCESPLKNAVDSDLTNVDADIRMNLSFEKGVGEFHVVGDAEMVSEDRTLAVSLQDSAVKFPAVSVNESKGCAVSQNMKSGNVQFQNAEKVTPSLGSCSGNDKIVGDSKPIELQITEKSIQSGRSFNFTMEGLPQAKRRKIEGQLLDASSASPNSKREPFQSIQDTMSTHLNGVEGNSETVLISPYLHISCEEGVDQSNASKSPHEEMDQNMKCCMEEGIKSSSKLQVMEAEHSLEGRDKNVKPSFTFESEQLGPPLVSSLTKRASGDFQGFLVEEAEGEGGTNIIHDMRSQCATEEHQGSLFLDDKLGPEIAENLTCMDERTMWKTNFQLEDGGLFSHCSIGSPHNQYLDLFGADQAKPVFEGFVMQEENEKPHIARDGIGFDKLDLPTTTIERASVLEQLCLSASIHTPLPHFSITDKLPRAPNFCQSVPNGLLEGMDLQSTLSLNDDAGKLLRASYSCLNEEANHAFQGSSTSDHRPFSSTQFAWNISKPCISPVGKLWRVSTSSSGSSGKRLSLNPELTCYPIEEDPCISEETEQKDDVSDAFHEGISSMTITGSARRELLGDITEEYLNPLASVSTAEKFSDRGSLDSVNIDINVPRTQNKGKEKLQNLYESKTRGTNEMRENQSLSVAENGVRRVTESLHNRFSKPKLSGKTSLRKGGPSISERESKHKNIVSNITSFVPLVQRAQGAAVVTGKRDVKVKALEVAEAAKRLEEKRENERKMKKEALKLERARLEQENLRQLELKKKKKEEERRKKEAEMAARKRLREEEEKEKEAKRKRTEEARRQQREHEQKLRAEKEKEKRHRATVEKVHERKEARDEVKIDKKVEEDTLVQKPETELRTSRVSTSDISKASIVLKDSEALSDCGEIQKVTGNLDKASENDNLVANTTKEESYEMSPYQSSDDEEEEEDDIPTKKFIPSWASKNYLVIAVSSQQKVDPNMIFPPESFCSINEVLVSRKQQQQK* 1715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 1484 1586 - -
Vvi19g0782 1714 Pfam Inner centromere protein, ARK binding region 1651 1704 IPR005635 -
Vvi19g0782 1714 PANTHER TROPONIN I 122 1689 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 456 482 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 604 626 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 1393 1413 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 611 625 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 487 513 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 215 238 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 1484 1597 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 186 243 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 441 455 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 314 338 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 1624 1646 - -
Vvi19g0782 1714 Coils Coil 1450 1549 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 1622 1665 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 278 338 - -
Vvi19g0782 1714 MobiDBLite consensus disorder prediction 425 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0782 Vvi-Chr19 8694040 8703563 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0782 - - vvi:100241254 3133.2