Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0776 ATGTCACTTTCAATAGATTCATCATCGCAGGTTCTTGAAAATGGATATGAACATGCTGAACTACTCTCCGGGAATAATGATGAACATGAAGGTGTCATGGTGAACATGGAAAAGCCTATGGACTCCAAGGTCTTTCTCACTGCACTTAGAGCTTCGATATCGCTGTGGAGGAAACAGGGCAAAAGGGGTGTTTGGATTAAATTGCCCATTGGCCTTGCAAATCTTATTGAAAGTGCAGTAAAGGAGGGATTTCATTATCATCATGCTGAGCCAGATTACCTGATGCTTGTTCATTGGATTTCTGAGTCCACCACTAGTACTATCCCTGCAAATGCCACACACCGAGTAGGCATTGGTGCCATTGTCATGAATGATAAAAGAGAGCTGCTTGTGGTCCAGGAAAAGAGCGGGAAGTTAAAAGGAACGGGAATATGGAAGATCCCTACTGGAGTAGTTGATGCGGGTGAGGATATCTTCAAGGCAGCAGTGAGAGAAGTAAAAGAAGAGACAAATATTGACACAGAATTTGTGGAAATCCTAGGATTCAGGCAAACCCACAAGTCATTCTTTGAAAAATCGGATTTGTTCTTCCTTTGCATGATGCGCCCACTCTCCTTTGATGTTCAGAAGCAAGAATTAGAGATTGACGCAGCCAAGTGGATGCCATTCGAGGAGTATACAGCTCAACAAATTGTCGAGAAACCTGGATTTTACAAGTGCATCACAGACATATGCTTAGCAAAGGTAGACGGGGACTACATCGGTTTCTCTCCAAGACTTGTAAAATCAAGTTTTACCGATCAACTGAGTTACTTTTATTTGAACGAACAAGATTCTAACAGTTCTTAA 849 0.4205 MSLSIDSSSQVLENGYEHAELLSGNNDEHEGVMVNMEKPMDSKVFLTALRASISLWRKQGKRGVWIKLPIGLANLIESAVKEGFHYHHAEPDYLMLVHWISESTTSTIPANATHRVGIGAIVMNDKRELLVVQEKSGKLKGTGIWKIPTGVVDAGEDIFKAAVREVKEETNIDTEFVEILGFRQTHKSFFEKSDLFFLCMMRPLSFDVQKQELEIDAAKWMPFEEYTAQQIVEKPGFYKCITDICLAKVDGDYIGFSPRLVKSSFTDQLSYFYLNEQDSNSS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0776 282 Pfam Nudix hydrolase domain 22 100 IPR040618 -
Vvi19g0776 282 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 111 129 IPR003293 -
Vvi19g0776 282 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 199 223 IPR003293 -
Vvi19g0776 282 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 72 90 IPR003293 -
Vvi19g0776 282 FunFam Nudix hydrolase 8 115 253 - -
Vvi19g0776 282 SUPERFAMILY Nudix 80 230 IPR015797 -
Vvi19g0776 282 CDD Nudix_Hydrolase_12 114 245 - -
Vvi19g0776 282 FunFam nudix hydrolase 2 19 105 - -
Vvi19g0776 282 Pfam NUDIX domain 114 228 IPR000086 -
Vvi19g0776 282 PANTHER NUDIX HYDROLASE RELATED 6 280 IPR003293 -
Vvi19g0776 282 Gene3D - 19 105 - -
Vvi19g0776 282 ProSitePatterns Nudix box signature. 150 171 IPR020084 GO:0016787
Vvi19g0776 282 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 115 243 - -
Vvi19g0776 282 ProSiteProfiles Nudix hydrolase domain profile. 113 243 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0776 Vvi-Chr19 8601741 8608554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0776 - - vvi:100256580 569.311