Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0766 ATGAGTGTGGAGGAAGGCGACGGAGGTGGGTTCGGCGACGGGGGAGATCCGGGGGATCAGTTCCACCGGAACGAGGCGATCTCCGCCGTTGCCGACGAGGGTTTTATCGGCGAGGAAGACGATGACTACGAGGATCTTTATAATGATGTGAATGTAGGCGAGGGTTTTCTTCAATCTCTCCGTAAAAATGAAGATTTAGGCTTTAGAAACGAGGTGGAGGAGAACAAGATTGATCCCGCGGTTCCATCAGTGCCCCCGACGCTGCCCCCAGCGGCGGGTATGTCAATACCTGGAGTGGGTGGTGATGTTGGCGGAGGTGCAGAGCGGAAGTTTGAGAAGGATGTGGCGGTAGGCGTTTCTGAGGGTGGGGCTAGGGTTTCTGTGAGATTGGAGGGTTATCAGAGTGTGGGGTACAGAGGGAATGAGATGGGCGTGAAAGGACCGGGTGGTGCGTCGCAAGGGGGAGCTACAGTTGGTGGAGGTGGGATGAGGGTTCAATTAGGGCAGTCGTCCATAAAAACTAGTGATTTTGAGGAGCAGACTGTGAACAATACGGTAGGGGTTCAAGGGATCGTGCAGCAACAACCACATGGTGGTGGTGTCGGGGAGTGTTGGAAACGAGGGTGGGTATGTGGTTGGCAACAATGGCATTGGTGGCAGTGTAGGCGGTGGTGGTGGTGGTGGAGGTGGTGGTGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGACAATACTTTTTGTTGGAGATTTACATTGGTTGAGTTCTATGATCCTGCTGCAGCCACAGCTTGTAAAGAGGGAATGAATGGGCATCTCTTTAATGGGCGACCTTGTGTTGTTGCATTTGCATCACCTTATAGTGTTAAGAGAATGGGAGAGGCCCAGGTGAATAGAAATCAGCAGATGGCCCAGACTAACATTTCTCAAGGGAGGAGGGGGCAGGGTGACGGTGGGGGAAAACCTGGTGGCAGCAATGTTCAACAAGGCGGGAATTTTCAAGGTGGGGATAATAATAGGGGTTATGGTAGAGGTAATTGGGGGAGAGGCAATGCCCAGGGGATGGGAGGTAGAGGGCCAGTTGGTCCAATGAGAAATAGGTCTGGGGGAATGGGTGGGAGGGGTATAATGGGGAATGGTGGAAATGGATTTGGGCAGGGTATTGCTGCAACGCCTCCTTTAATGGGTGGCTATGGAGGTTTTCCTGCTGGACCAACACCACCCTTTTCAGGAATATTGTCTTCATTCCCACCTGTTGGAGGAGTTGGTTTGCCTGGTGTAGCTCCTCATGTGAACCCAGCATTCTTTGGACGAGGGATGCCCATGAATGGAATGGGGATGATGCCGGCGACAAGTGTTGAGGGACCTAATATGGGGATGTGGTCGGATCCAAATATGGCTGGATGGGCTGGTGATGAGCATGGTGGGAGAGCTGGGGAGTCTAGTTATGGGGAGGAAGCGGGATCTGATCATCAGTATGGTGAGGTAAGTCATGATAGGGGAGGCTGGCAAAACACAATGAAGGAAAAGGACAGAGGATCTGAACGGGACTGGTCAGGATCCTCTGACAGAAGATATCGAGATGATAGAGAACAAGGGTTTGATAGAGACATGCCTAGGGAAAAAGATCTGGTTCATGAAAATGATTGGCCTGAAAGAAAGCATCGTGAAGATAGAGATATTGGTCGTGATCGTGATAGGGAGCGTGATCGAGAACGGGAACGTTCTCGAGATCGCGAACGGGACCGTGATAGGGAGCGTGATCGGGATAGGGATCGTGACCGTGATCGGGAACGATACAGGGAAGACAGAGACAGATATGCTGATCATCATAGGTATAGGGACCGTGAATCAGAACATGATGATGAATGGGATAGGGGACGATCATCACGAACACACAGCAAATCACGATTATCACAAGAGGAAGAACAACGATCAAGATCAAGGGATGCCGATTATGGGAAGAGGCGACGGCTAACCTCTGAGTAA 1986 0.5176 MSVEEGDGGGFGDGGDPGDQFHRNEAISAVADEGFIGEEDDDYEDLYNDVNVGEGFLQSLRKNEDLGFRNEVEENKIDPAVPSVPPTLPPAAGMSIPGVGGDVGGGAERKFEKDVAVGVSEGGARVSVRLEGYQSVGYRGNEMGVKGPGGASQGGATVGGGGMRVQLGQSSIKTSDFEEQTVNNTVGVQGIVQQQPHGGGVGECWKRGWVCGWQQWHWWQCRRWWWWWRWWWRWWWWWWWWWDNTFCWRFTLVEFYDPAAATACKEGMNGHLFNGRPCVVAFASPYSVKRMGEAQVNRNQQMAQTNISQGRRGQGDGGGKPGGSNVQQGGNFQGGDNNRGYGRGNWGRGNAQGMGGRGPVGPMRNRSGGMGGRGIMGNGGNGFGQGIAATPPLMGGYGGFPAGPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPATSVEGPNMGMWSDPNMAGWAGDEHGGRAGESSYGEEAGSDHQYGEVSHDRGGWQNTMKEKDRGSERDWSGSSDRRYRDDREQGFDRDMPREKDLVHENDWPERKHREDRDIGRDRDRERDRERERSRDRERDRDRERDRDRDRDRDRERYREDRDRYADHHRYRDRESEHDDEWDRGRSSRTHSKSRLSQEEEQRSRSRDADYGKRRRLTSE* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0766 661 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 588 656 IPR034772 -
Vvi19g0766 661 Gene3D - 246 331 IPR012677 -
Vvi19g0766 661 MobiDBLite consensus disorder prediction 1 22 - -
Vvi19g0766 661 MobiDBLite consensus disorder prediction 490 661 - -
Vvi19g0766 661 MobiDBLite consensus disorder prediction 463 661 - -
Vvi19g0766 661 SUPERFAMILY RNA-binding domain, RBD 248 307 IPR035979 GO:0003676
Vvi19g0766 661 MobiDBLite consensus disorder prediction 305 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0766 Vvi-Chr19 8464539 8466738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0766 K14398 - zju:107433910 624.78