Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0764 ATGGGTGACGAGACCGAAGTTGTGGCGGCAGCAGAGAATGGAAATGGAACTACTCTGCCGGAGAAAATGGAATCTGTTATGGAGAAGAAAGAGGAAGAAAATAATGGAGTGAAAGAAATGGAAGAAGACAGCAAAGGTGATGAGAAAGTTGAGACTGAGGCGCTTGAAGCTGAGAAAATGGATGAAGACCTAGCGGCCAAGGAAGAGAAGGAAAACAAAGAACTAGAAGAAAAAGAGGAACCCAAAACTGAGGTGATGGAAGAGGATAACGTGTCCAAAGAAAATGAAGCAAGTGAAGAGAAGGTAGAGAGCAAAGAGAATGTGGAAGAGAAGGTTGATGGTTCTAAGGAAAAAGAGAAGGGAGGAGAGATAAAGGATGGGAAAGGGCCAAGGAAGCGAGGAAAAGGGAGGAGCAGTGGAGAGAGAGTCAAAGATAAGGTGAAGGAAGTGGAAGAAAAAAAGGTGAAGGAACCAAGGACTCCTGCAGCTTCCACTATTGCACGACCTGTACGGGAGCGGAAATCTGTTGAAAGGCTCGTGGCATCCATTGAAAGAGACTCAACAAAGGAATTTCATATTGAAAAGGGTCGTGGGACTGCACTGAAAGATATACCTAATGTGGCATACAAATTGTCGAAAAGGAAGAGCGATGACACTTTTAAATTGCTTCATACCATTCTCTTTGGAAGGAGAGGAAAGGCGTTTCAGGTTAAGAATAATATATCCCGGTTTTCTGGCTTTGTGTGGCATGAGAACGAGGAAAAACAAAAGATTAAAGTAAAAGAGAAATTTGACAAGTGCGTTAAAGAGAAGCTGTTGGAGTTCTGTGACGTTCTTGACATATCAATTGCCAAAACTACAACAAGGAAGGAAGATATCGTTACAAAGCTGATAGAATTTTTGGTGGCTCCTCATCCTACAACTACTGTGTTACTTGCAGAAAAAGAGCAGTCAATTAAGGGCAAAAAGCGCAAGAGGGTGGTCAAACGGAATTCATCTATGTCTGGGAGCACATCTTCAAAACGTTCAGCGAAGAGTCGAAGAAAGACTGAGGATACTGATACAATGGAGGAGAAAAAGAGTATACATGACTCTGAAGATGATTCAGAAGAAGAGGATGACAAAAATGAAGAGGAGGAAAATGAGAATGGTATTCCTGAAAGATCTGAGGATGAGATATCTGAGCATTCTGAAAGTGAGGAAAAAGGAAATGAATCAGAAGATGAGTCTGAAGAAGAAATAGTAAAACGCAAACGAGATTCAAAGAAAACACCCGTGAAGAAGGAATCCGCAGGAAAAGCTAAAACCAAGAAAACACCAACACCAAAGAAATCAATCTCTCCACCAAAAAGGTCTAAGAAATTATCATCAAACCGCTCTAAGGCTGATGATGACAGTGATACAAGTCCAAAGGTGTTTTCAAGAAAGAAGAAAAATGAGGTAGCTAAAGGAAGGTCTTCGACTCCAAAGAAATCTGTCTCCAAGGAAAAACCTGGGAAAAAGGCGGTGAAAGGGAAGGACAAGCCCAAAGAAGATAAATCGAGTCCAAGTGATGACGAATTAAGAAATGCAATATGTGAAATACTTAAAGAAGTTGACTTCAATACGGCTACATTTACCGACATTCTGAAGCAACTTGCTCGGCAGTTTGAAACGGATCTTACTGCCAGAAAGTCATCCATAAAGCTCATCATCCAGGAAGAGCTTACAAAGCTAGCTGATGAGGTTGACGATGAAGACGAAGAAGGTGATGCTGAGAAAGATGAAGCCCAGCCTGCCAGCCAAGAGGTGGAGGCCTGA 1800 0.4189 MGDETEVVAAAENGNGTTLPEKMESVMEKKEEENNGVKEMEEDSKGDEKVETEALEAEKMDEDLAAKEEKENKELEEKEEPKTEVMEEDNVSKENEASEEKVESKENVEEKVDGSKEKEKGGEIKDGKGPRKRGKGRSSGERVKDKVKEVEEKKVKEPRTPAASTIARPVRERKSVERLVASIERDSTKEFHIEKGRGTALKDIPNVAYKLSKRKSDDTFKLLHTILFGRRGKAFQVKNNISRFSGFVWHENEEKQKIKVKEKFDKCVKEKLLEFCDVLDISIAKTTTRKEDIVTKLIEFLVAPHPTTTVLLAEKEQSIKGKKRKRVVKRNSSMSGSTSSKRSAKSRRKTEDTDTMEEKKSIHDSEDDSEEEDDKNEEEENENGIPERSEDEISEHSESEEKGNESEDESEEEIVKRKRDSKKTPVKKESAGKAKTKKTPTPKKSISPPKRSKKLSSNRSKADDDSDTSPKVFSRKKKNEVAKGRSSTPKKSVSKEKPGKKAVKGKDKPKEDKSSPSDDELRNAICEILKEVDFNTATFTDILKQLARQFETDLTARKSSIKLIIQEELTKLADEVDDEDEEGDAEKDEAQPASQEVEA* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0764 599 MobiDBLite consensus disorder prediction 344 366 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 367 386 - -
Vvi19g0764 599 Gene3D - 506 571 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 313 520 - -
Vvi19g0764 599 Coils Coil 50 78 - -
Vvi19g0764 599 Coils Coil 88 108 - -
Vvi19g0764 599 Coils Coil 362 382 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 572 599 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 572 587 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 1 164 - -
Vvi19g0764 599 Coils Coil 562 582 - -
Vvi19g0764 599 Pfam DEK C terminal domain 516 569 IPR014876 -
Vvi19g0764 599 Coils Coil 23 43 - -
Vvi19g0764 599 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 515 570 IPR014876 -
Vvi19g0764 599 PANTHER DEK PROTEIN 33 586 IPR044198 GO:0003677|GO:0006325
Vvi19g0764 599 MobiDBLite consensus disorder prediction 456 520 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 387 436 - -
Vvi19g0764 599 FunFam DEK domain-containing chromatin associated protein 506 571 - -
Vvi19g0764 599 SUPERFAMILY DEK C-terminal domain 509 569 - -
Vvi19g0764 599 MobiDBLite consensus disorder prediction 23 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0764 Vvi-Chr19 8444501 8454663 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0764 K17046 - vvi:100249691 762.681