Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0762 ATGATTGGGTACTCAGATTCTCGGAAAGACGCTGGAAAGCTCTCAACGGCATGGGCATTATACAAAGATCAAGAGGAGCTTATTAAAGTTGCTAAGCAATATGGTATCAAGCTAACCATGTTCCATGGTCGAGGCGGCACAATTGGAAGAGGAGGTGGTCCAACCCATCTTGCTATATTGTCTCAACCACCAGATACAATTCATAGTTCACTCCGAGTTACTATACCAAGGAAGAGACGTTTATTTTGA 249 0.4297 MIGYSDSRKDAGKLSTAWALYKDQEELIKVAKQYGIKLTMFHGRGGTIGRGGGPTHLAILSQPPDTIHSSLRVTIPRKRRLF* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0762 82 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 1 75 IPR015813 GO:0003824
Vvi19g0762 82 Pfam Phosphoenolpyruvate carboxylase 1 75 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vvi19g0762 82 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 75 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0762 Vvi-Chr19 8407035 8407283 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0762 K01595 - vvi:104877662 144.436