Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0759 ATGGCGCCTGTGAAGGCCACAGGGGCTGTTTTTGCTGCTCTCTCCATCGCTGTACTCTCCTATCTCCTCTGCAATTCTCGATCCAGAAAAACCCACAAACCGATATCGAAAAAGAAGCCAAGAAGAGGACTTATTGAAGCCATTGGCAACACCCCTTTGATTCGAATCAATAGCCTCTCTGAAGCCACTGGGTGCGAGATTCTTGGGAAGGCTGAGTTTCTGAATCCAGGAGGGAGTGTGAAAGATAGAGTAGCAGTGAAAATCATTGAAGAGGCTCTGGAATCTGGCCAGCTAGCTCCAGGTGGAGTAGTGACAGAAGGCAGTGCTGGTAGCACTGCCATTAGCCTTGCTACTGTGGCTCCTGCATATGGATGCAAATGTCATGTTGTTATCCCAGATGATGTTGCCATTGAGAAATCTCAAATTCTCGAAGCCCTTGGAGCTACAGTTGAAAGAGTTAGACCAGTTTCAATTACACATAAAGACCACTATGTCAATGTTGCAAGGAGAAGAGCTTTGGAGGCAAATGAATTTGCATCAAAGCATGGAAAATATATAGGAATGGATGCTGATGGCCTAGTGCCAGCCAATGGTCATATATCTGAGGAAGAGAAACAAAATTCAGTTTTCTCAAGCAATTGTAAAGGTGGTTTCTTTGCAGATCAGTTTGAAAACCTGGCAAATTTCCGAGCTCACTATGAGGGTACTGGACCTGAGATATGGGAGCAGACCAGTGGTGATCTGCATGCTTTCGTGGCAGCTGCGGGAACTGGTGGCACTCTGGCTGGTGTTTCCCGGTCTCTCCAGGAAAAAAGTCCAAATATCAAATGCTTTCTGATTGACCCTCCTGGTTCTGGCTTGTTCAATAAGATAACAAGGGGAGTAATGTACACTAGAGAGGAGGCTGAAGGACGGAGACTGAAGAATCCATTTGATACCATTACTGAAGGCATTGGAATCAACCGGTTGACCCAGAATTTTTTGATGGCAGAACTTGATGGGGCTTTCCACGGCACAGATATGGAAGCTGTTGAAATGTCCAGGTATCTTCTCAAGAATGATGGGCTATTTGTCGGGAGTTCTTCAGCCATGAACTGCGTTGGAGCTGTCAGAGTGGCACAGTCGATCGGCCCTGGTCACACAATTGTAACAATTCTGTGTGACAGCGGGATGAGGCATCTGAGCAAATTTTACGATTCCCAGTATCTGTCTCAGCATGGTTTGACACCCACAGCAACCGGGTTAGAGTTCCTTGGCATCAGCTGA 1266 0.4652 MAPVKATGAVFAALSIAVLSYLLCNSRSRKTHKPISKKKPRRGLIEAIGNTPLIRINSLSEATGCEILGKAEFLNPGGSVKDRVAVKIIEEALESGQLAPGGVVTEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPVSITHKDHYVNVARRRALEANEFASKHGKYIGMDADGLVPANGHISEEEKQNSVFSSNCKGGFFADQFENLANFRAHYEGTGPEIWEQTSGDLHAFVAAAGTGGTLAGVSRSLQEKSPNIKCFLIDPPGSGLFNKITRGVMYTREEAEGRRLKNPFDTITEGIGINRLTQNFLMAELDGAFHGTDMEAVEMSRYLLKNDGLFVGSSSAMNCVGAVRVAQSIGPGHTIVTILCDSGMRHLSKFYDSQYLSQHGLTPTATGLEFLGIS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0759 421 PANTHER CYSTATHIONINE BETA-SYNTHASE 43 404 - -
Vvi19g0759 421 FunFam Cysteine synthase 78 178 - -
Vvi19g0759 421 CDD CBS_like 49 395 - -
Vvi19g0759 421 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 70 88 IPR001216 GO:0006535
Vvi19g0759 421 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 38 403 IPR036052 -
Vvi19g0759 421 FunFam Related to cysteine synthase 200 406 - -
Vvi19g0759 421 Gene3D - 75 184 IPR036052 -
Vvi19g0759 421 Pfam Pyridoxal-phosphate dependent enzyme 47 388 IPR001926 -
Vvi19g0759 421 Gene3D - 192 406 IPR036052 -
Vvi19g0759 421 FunFam Cysteine synthase, putative 48 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0759 46 395 Miscellaneous Gene Families AT3G04940 29.545 2.23e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0759 K01738 - vvi:100260099 827.009