Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0750 ATGTCTACAACCATTCGATCTCGTGGCCTCTGCTCCTTCATCTCCAAGAACAACCGCCTCTTCTGCTCGAAAGTCTCCTCTTCTCCTCCCAAACCACCACCCTCCCCCGCTTCAGTCGCTGCCGTCGATCAATCTCCGGCTAACCAGCCGATCATATCTTCTGCTGCTCTCGTTGATGGCCAAAATCCACCTCCTATTCCTCCGCCGGCGCCTCCGTCCGCCAAGAAGTCATGGAACTTCCTCAAGTTCGGTCTCATTGGAGCTCTCACCGTCGGCGTTGCTACCGCTGGTTACGCTTCTTATGCATACACACTGGATGAAGTAGATGAGAAGACGAAGGCTTTTCGAGCATCTGCTAAGGATAGTGTGGAGGATGATGCATCTGCTTTTGATAAATTTAAAGCTTTGGCATACACTTCTGCAGTCACAGTCCCTGCTAAAGCAATTGATCTCTACTTAGACATGAGGAGATTAATTGAAGAACAAGTGCATGGTTTTACTGAACCATTATCAGATAAGCTGCTTCCTGATTTGCACCCAATGGAGCAACATGTGCTCACACTTGTTCTCGATCTGAATGAGACATTAATATACTCTGATTGGAAGCGTGATAGAGGTTGGCGAACATTCAAAAGACCTGGAGTTGATGCCTTCTTGGAACACCTAGCTCAGTTTTATGAAATTGTAGTGTATTCGGACCAACTGAGTATGTATGTTGATCCTGTTGTTGAGAGATTGGATAAGAAGCAGTGTATACGACATAGGCTATCAAGGGCTGCGACTAGATATCAGGATGGAAAACATTACAGAGACCTCTCAAAGCTGAACAGAGATCCTGCGAAGATTCTTTATGTGAGTGGCCATGCGCTAGAAACTAGCCTTCAGCCTGAAAATTGTGTCCAAATTAAGCCATGGAAGCTTGAAGAAGATGACACACAACTTTTGGATCTTATTCCTTTTCTTGAATATGTTGCCCGCAATAGACCAGCTGATATCAGACCAGTCCTAGCATCTTATCAAGGACATGATATTGCCAAGGAATTCATCGAGCGTTCTAAAGAGTATCAGAGGCGGATGCAAGAACAGAAGCAGCATGGCCGTTTCTGGAGACGTTGA 1116 0.4579 MSTTIRSRGLCSFISKNNRLFCSKVSSSPPKPPPSPASVAAVDQSPANQPIISSAALVDGQNPPPIPPPAPPSAKKSWNFLKFGLIGALTVGVATAGYASYAYTLDEVDEKTKAFRASAKDSVEDDASAFDKFKALAYTSAVTVPAKAIDLYLDMRRLIEEQVHGFTEPLSDKLLPDLHPMEQHVLTLVLDLNETLIYSDWKRDRGWRTFKRPGVDAFLEHLAQFYEIVVYSDQLSMYVDPVVERLDKKQCIRHRLSRAATRYQDGKHYRDLSKLNRDPAKILYVSGHALETSLQPENCVQIKPWKLEEDDTQLLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEFIERSKEYQRRMQEQKQHGRFWRR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0750 371 Coils Coil 345 365 - -
Vvi19g0750 371 SMART forpap2 184 312 IPR004274 -
Vvi19g0750 371 FunFam Mitochondrial import inner membrane translocase subunit TIM50 172 354 - -
Vvi19g0750 371 PANTHER DULLARD PROTEIN PHOSPHATASE 90 346 - -
Vvi19g0750 371 SUPERFAMILY HAD-like 173 337 IPR036412 -
Vvi19g0750 371 ProSiteProfiles FCP1 homology domain profile. 181 324 IPR004274 -
Vvi19g0750 371 Pfam NLI interacting factor-like phosphatase 186 333 IPR004274 -
Vvi19g0750 371 CDD HAD_FCP1-like 186 302 - -
Vvi19g0750 371 Gene3D - 171 354 IPR023214 -
Vvi19g0750 371 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0750 Vvi-Chr19 8241030 8246977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0750 K17496 - vvi:100244624 696.812