Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0743 ATGAATTTGGGCGATCTCAACAAGGTATGGGAAGTGAAGCCCCTGAAAAAGGCTGGAGAAGATGAAGCGAGGAAGATTCTGGAGAGGGTAGCCAAACATGTCCAACCCATTATGCGGAAACACAAATGGAGAGTCAAGCTTCTCTCTGAATTCTGCCCAAACAATCCGGCTCTTCTAGGGTTGAATGTAGGGGGTGGCATTCATGTGAAGTTGAGACTTCGGAGGCCCAACAGAGATTGGGATTTCTTCCCATTCGATCAAATTCTTGATACCATGCTTCATGAGCTTTGCCACAATGTCCATGGTCCTCATAATGCAGATTTCTACAAGCTTTGGGATGAAATCAGAAAGGAGTGTGAGGAGCTGATGGCAAAGGGCATAACTGGAACAGGGGAGGGGTTTGATCTTCCTGGGAGGCGTTTGGGTGGTTTCTCTCGTCAACCTCCTGTTTCATCTCTACGCCAAACTGCACTTGCTGCTGCAGAAAAGAGAGCCCGTCTAGGATCTCTAGTGCCATCTGGTCCTAAACGCCTTGGAGGTGATAGCAGTATCATGGATGCACTTAGTCCAATACAAGCTGCTGCAATGGCTGCAGAAAGGAGATTACAGGATGATATCTGGTGTGGCTCCCAGAGTTGTGAAGCTTCAGAGGGTGGTGAAAGTAGCTCTGATCTCTCTGACAGGCATGTACATAGGGAGCAAAGTGCTGGAATGTCAAGTCATGGTAGTGGTAGAGGTGCACTTGATTTGGATGTGACATCTCGAAAAAGAAGTCATGAAACTGGATCAAGTTTTGTGGATCTATCCAAGTGTGCTTCAGCCTCTGGGTCTGTGCTTGGCCACAATGCAACTCACAATACTGAGGAATCGATTATGTGGGAGTGTGGAATTTGCACTTTGTTGAATCCACCATTAGCTCCTATATGCAAGGTTTGCAGCACTGAGAAGCCAAAAGATGTTGGTATCAAGTACAAAGTCTGGTCATGTAAATTCTGTACTCTGGAAAACAACGTAGAGTTAGACAAATGTGGTGCATGCGGACAGTGGAGATATTCTCATGGCCCACCAGTGTCAACTCGTGCACCCAATCTTGGCACTTGA 1101 0.4678 MNLGDLNKVWEVKPLKKAGEDEARKILERVAKHVQPIMRKHKWRVKLLSEFCPNNPALLGLNVGGGIHVKLRLRRPNRDWDFFPFDQILDTMLHELCHNVHGPHNADFYKLWDEIRKECEELMAKGITGTGEGFDLPGRRLGGFSRQPPVSSLRQTALAAAEKRARLGSLVPSGPKRLGGDSSIMDALSPIQAAAMAAERRLQDDIWCGSQSCEASEGGESSSDLSDRHVHREQSAGMSSHGSGRGALDLDVTSRKRSHETGSSFVDLSKCASASGSVLGHNATHNTEESIMWECGICTLLNPPLAPICKVCSTEKPKDVGIKYKVWSCKFCTLENNVELDKCGACGQWRYSHGPPVSTRAPNLGT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0743 366 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 365 - -
Vvi19g0743 366 ProSitePatterns Zinc finger RanBP2-type signature. 293 312 IPR001876 -
Vvi19g0743 366 ProSitePatterns Zinc finger RanBP2-type signature. 327 346 IPR001876 -
Vvi19g0743 366 Pfam WLM domain 8 203 IPR013536 -
Vvi19g0743 366 ProSiteProfiles Zinc finger RanBP2 type profile. 288 318 IPR001876 -
Vvi19g0743 366 SMART zf_4 291 315 IPR001876 -
Vvi19g0743 366 SMART zf_4 325 349 IPR001876 -
Vvi19g0743 366 Gene3D - 286 326 - -
Vvi19g0743 366 MobiDBLite consensus disorder prediction 213 248 - -
Vvi19g0743 366 MobiDBLite consensus disorder prediction 221 235 - -
Vvi19g0743 366 SUPERFAMILY Ran binding protein zinc finger-like 289 316 IPR036443 -
Vvi19g0743 366 ProSiteProfiles WLM domain profile. 1 203 IPR013536 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0743 K22685 - vvi:100260002 739.954