Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0739 ATGAAACTTCAGGCGACATCTGGAACCTTATCTCTTATTCGATATAACCCACCTCCCTTCTCACCACCGCATCGTTGTACTACCCCTTTCTCTCTCCCCAAACACCGCCTTTTCATGGCTGCTTGTATTGACACTTCCAGAGCAGAGACTGCCCAAACGAACCAACTTTCTTGCGAGCCAAACGGGTCCCAACTCGATGATCATATGTACAAGTTCGCAAATTTCTGCCGACCCAGTTTCTCTGATCTTGTTTCCTGCGTGCCCATGTCGCAGAATGGCCGCAAAAGAATTCACACAAGTACAGTCGAAGACGACCTCTGTGGAGCTGATTTGTGGCTGAAAATTCAAGACGAAGCTAGGTCTGATGTTGAGCAAGAACCCATCTTGTCAAGCTACTATTACAGCTTAATTCTGTCTCATAAATCATTGGAAAGTGCCCTAGCCAATCATCTTTCGATCAAATTGAGCAATTCGAGTCTTCCCAGCAGTACACTCTATGATCTCTTTATGGGTGTGTTGGTTGAAGATGGGGAAATCATGGGAGCTGTTAAAGATGATTTGAGGGCAGTCAAGGAGAGAGACCCAGCTTGCATAAGCTACGTGCAGTGTCTGGTGAATTTCAAAGGCTTTTTGGCATGCCAAGCTCATAGAGTGGCACATAGGCTGTGGTCGCAAGGGAGAAAAATTCTGGCATTGGTAATTCAGAATAGAGTGTCTGAAGCTTTTGCCGTGGATATCCATCCTGGGGCTAAGATTGGAAGAGGAATATTGCTTGATCACGCGACTGGAGTCGTCATAGGGGAGACAGCGGTGATTGGAGATGATGTGTCGATTTTGCATAATGTGACCTTAGGAGGGACTGGGAAGGTGTCTGGTGATAGGCATCCGAAGCTTGGCGATGGGGTGCTGATTGGTGCTGGGACTTGTATTTTGGGAAATGTTAGAATTGGGGATGGGGCCAAGGTTGGTGCTGGTTCAGTGGTGTTAAAGGAAGTGCCTCCGAAAACTACTGCAGTTGGGAACCCCGCAAGGTTGGTTGGAGGGAAGGAGAATCCAATTAAGCTTGATAAGATTCCCAGTTTCACCATGGACCAGACTTCTCATATCTCTGAGTGGTCTGATTATGTTATTTAA 1134 0.4674 MKLQATSGTLSLIRYNPPPFSPPHRCTTPFSLPKHRLFMAACIDTSRAETAQTNQLSCEPNGSQLDDHMYKFANFCRPSFSDLVSCVPMSQNGRKRIHTSTVEDDLCGADLWLKIQDEARSDVEQEPILSSYYYSLILSHKSLESALANHLSIKLSNSSLPSSTLYDLFMGVLVEDGEIMGAVKDDLRAVKERDPACISYVQCLVNFKGFLACQAHRVAHRLWSQGRKILALVIQNRVSEAFAVDIHPGAKIGRGILLDHATGVVIGETAVIGDDVSILHNVTLGGTGKVSGDRHPKLGDGVLIGAGTCILGNVRIGDGAKVGAGSVVLKEVPPKTTAVGNPARLVGGKENPIKLDKIPSFTMDQTSHISEWSDYVI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0739 377 NCBIfam serine O-acetyltransferase 183 344 IPR005881 GO:0005737|GO:0006535|GO:0009001
Vvi19g0739 377 Gene3D serine acetyltransferase, domain 1 95 244 IPR042122 -
Vvi19g0739 377 SMART SATase_N_2_a 111 215 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vvi19g0739 377 SUPERFAMILY Trimeric LpxA-like enzymes 110 347 IPR011004 -
Vvi19g0739 377 PANTHER SERINE ACETYLTRANSFERASE 98 377 - -
Vvi19g0739 377 Gene3D Hexapeptide repeat proteins 245 365 - -
Vvi19g0739 377 Pfam Serine acetyltransferase, N-terminal 111 215 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vvi19g0739 377 FunFam serine acetyltransferase 1, chloroplastic 92 244 - -
Vvi19g0739 377 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 304 332 IPR018357 GO:0016740
Vvi19g0739 377 FunFam Serine acetyltransferase 245 371 - -
Vvi19g0739 377 CDD LbH_SAT 242 342 IPR045304 -
Vvi19g0739 377 Pfam Bacterial transferase hexapeptide (six repeats) 295 329 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0739 Vvi-Chr19 8107916 8109049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0739 111 346 Miscellaneous Gene Families AT2G17640 56.780 2.81e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0739 K00640 - vvi:100246391 746.888