Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0730 ATGGACCTTTCATCAAACCATTTCAGTGAATCAATTCCATCTCTGATTCTACCAAACAAGATGATCACTAGTTTGTCTCCAGACAGCGATCTTCCTTCCCCATTTTTGAAGGAGCTAGATCTTAGTGATAACGTGTTGCAGGGCCCTATTCCAAGATGGATTGCTCAACTCACGAGTCTAGAAGTCATTTATCTTTCTTCCAATGACTTCAAAGGTAGCATGGACTTGGACATGTTCTCAAACTTGACCACTCCTCGTTATCTTGATCTATCTGAAGTCCTTGATCTATCAAATAACAATTTGGATGGCACAATACCAAGTTGTCTAGGTAACTTCAGCAGTTCTCTTAACAACCTTGATGGCCCTATACCATCATCACTGGAGAATGCTCACCAGCTTGAGTCATTGGCTCTCTCAAACAACAAGCTATCAGGGGAGATTCCTGTGCAGTTAACAAGTCCAACATTCCATTCCTTCTTGGACTTGGCAGGAAACAACCTCGAAGGAGCCATACCTAGCGGAGGTCAATTCAACACATTTCCTCTAAAATCATACGAGGGGAACCCAATGTTATGCGGATTTCCATTATCCAGGAAATGCAGAGTCGATGAGGAAGCAGAGGCATCAACTCATGAACGACTCTTGGACTCTGATCCGAGAATTGAATTTGATTGGAGGGTGGCATGGATGGGATACGGGTGTGGGGTGGTGGCAGGGTTGAGTATTGGCTACATTCTATTCTGGGGGAATGGAATCTTCGCCCAGACCATTCCAATAAACAGGCAGCATCCTCAATCAACAAGGAGGCGAAGGAGGAGGATTTAA 825 0.4436 MDLSSNHFSESIPSLILPNKMITSLSPDSDLPSPFLKELDLSDNVLQGPIPRWIAQLTSLEVIYLSSNDFKGSMDLDMFSNLTTPRYLDLSEVLDLSNNNLDGTIPSCLGNFSSSLNNLDGPIPSSLENAHQLESLALSNNKLSGEIPVQLTSPTFHSFLDLAGNNLEGAIPSGGQFNTFPLKSYEGNPMLCGFPLSRKCRVDEEAEASTHERLLDSDPRIEFDWRVAWMGYGCGVVAGLSIGYILFWGNGIFAQTIPINRQHPQSTRRRRRRI* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0730 274 Pfam Leucine Rich Repeat 92 112 IPR001611 GO:0005515
Vvi19g0730 274 Pfam Leucine rich repeat 14 70 IPR001611 GO:0005515
Vvi19g0730 274 SUPERFAMILY L domain-like 2 197 - -
Vvi19g0730 274 Gene3D Ribonuclease Inhibitor 1 209 IPR032675 -
Vvi19g0730 274 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 1 91 IPR045273 -
Vvi19g0730 274 FunFam Leucine-rich repeat receptor-like protein kinase 111 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0730 Vvi-Chr19 7963575 7965054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0730 1 213 Miscellaneous Gene Families AT1G17240 38.496 4.12e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0730 - - vvi:104877657 343.199