Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0711 ATGGACGCCGAAGCCCTCCGCCGCTACATTATGGACCACCCCAACGACCGTGAGACCCTCCGCTCCGAACTCCTCGACGCCTTCCAGGTAGCACGGGACCCGGCAAAGATGGTTCTGGACGCTTTGACAGGGTTTTTCCCGTCAAATGCAAACGAAGATGGATCCAGTGAGCTGCACACTATGAGGCGGAGCTGCGTGTTCATGTTGGAGCAGTTGATGCTGTTTTCTCCGGAAATTGGTGAGGATGTGAGGCAGAGAGCGAAGAGTTTGGCGCAGGAGTGGAAGGGGAAAGTGAAAGTTGGAGACAACACGCTAAAGCCTATGGGGTTTCTGCATCTTCTTGCGGCGTATGGGTTGGGCTCGGATTACGATAGTACTGAGCTTCTTGAGCTTTTGATCGATGTTGTTCGGTATCGGGAAGTCTTTGGCTTGTGCCGCGGGCTCAATTTGGTGGATAAAGTTCCCGATCTTATTCAAAATCTCATTGGCAGTGGCAAGCCAAATCTGGCAGTTAAATTTGTTTTAGAATTTAAGCTGACTCACAAGTTTCCGTTAATCGCCATCTTGAAAGACATTGTGGAGTCGTCCAGGGATGTTGCTAGAAAAGTTCGCAAAGATGGAAAGCATTCTCTTCAGTCAGTGAATGAAGCCACAAGCAAAGAAATCAGTGCATTGAAACTAGTGACTAAGTACATTAAAGACTACGATCTCAACAATGAATACCCTGGGGCCCCCCTTGAAGAGCGCATTCAGAAGCTCGAGAGCCAAATGGCCGCCAGGACGGCTGCCAAAAAGCGCCCTGCACTTGCCCCTGCTCCCAGGCCTAAGCAGCAGAAGAAGCAAAAAAGCAAGCAGGCTCAGACAACGGCAACAGCAAGTCCCTCAGTCCCAAGCGGTGCAGCAGGTACCAGTTCAACAGCTGCTCCATTCCAACAACCTCATTTGCAGGCACCGGGTTTGGTGCCAGATGGTCCTGTTCCATTCATGAACCCATCAGCTGGGCTGTATGGCTTTGCAGGAGTCCCCATGGGCTTCCCGGGGAACCTTGGCCCTCCTATGCCCCATTTACACCCAATGGAACCACAGCTGCCGATGCCATTTGCTCATGGTGGATACGGTTTGCAGTCTCTCTACCCTCCAGCTTACTTTCATCAGTAG 1158 0.5147 MDAEALRRYIMDHPNDRETLRSELLDAFQVARDPAKMVLDALTGFFPSNANEDGSSELHTMRRSCVFMLEQLMLFSPEIGEDVRQRAKSLAQEWKGKVKVGDNTLKPMGFLHLLAAYGLGSDYDSTELLELLIDVVRYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLEFKLTHKFPLIAILKDIVESSRDVARKVRKDGKHSLQSVNEATSKEISALKLVTKYIKDYDLNNEYPGAPLEERIQKLESQMAARTAAKKRPALAPAPRPKQQKKQKSKQAQTTATASPSVPSGAAGTSSTAAPFQQPHLQAPGLVPDGPVPFMNPSAGLYGFAGVPMGFPGNLGPPMPHLHPMEPQLPMPFAHGGYGLQSLYPPAYFHQ* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0711 385 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 1 289 - -
Vvi19g0711 385 Pfam Frigida-like protein 1 261 IPR012474 -
Vvi19g0711 385 MobiDBLite consensus disorder prediction 256 323 - -
Vvi19g0711 385 MobiDBLite consensus disorder prediction 282 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0711 Vvi-Chr19 7740415 7751725 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0711 - - vvi:100262244 681.789