Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0703 ATGTTGCTTTTACTGATTGATATCATGGATTCCCCACAATCTGTTGTGTCACCATTCAAAAGCTCCCCTGTCTCCATTGAGCCAGAGAAGCAGAAATCCGACCTTTTTGTCCGAAACCCTGGTTGCTTGTCTGGGGGAATCGAAGTTCACAGAAAGGAAAGCGGCATGGTGTGCAACATGGATGCCTTTGTTGGGTCTCTGGAGGTTTACATACATCAGGCGAGGGACATCCACAACATATGCATTTACCACAAGCAAGATGTCTATGCTAAGCTTTGCCTAACCAGTGATCCCGAAAATGCAGTCTCCACCAAAATTATTAATGGTGGAGGGCAGAACCCAGTCTTCAATGATAATCTCCGGCTCAGTGTCCGAACAACGGAATCCTCTCTTAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAATTATCTTGAGGATCAGTTGCTAGGGTTTGCTTTGGTGCCTCTATCAGAAGTACTGCTCAACAATGGGAAGCTAGAGAAAGAGTTCTCTCTCTCCTCGACTGATTTGTTCCATTCCCCAGCTGGGTTTGTCCGGTTGTCTCTCTCCTATAATGGAGCTTCCCCAGAAGTAATGGCAATTCCTGCACTCCCAACAGCCTTGGCCACAAATGAAGCTTCACAGGATACTGAGATATCTGAGTCCATGCCCAGTGATTATGATGCCATTGAGTTCCCAGATCCAAAGATTATGAACGAAAACCAGTTGATGGTTTCAGAGTATTTTGGTATCCCGTGTACAAATTTAGACTCGCGGAGCTCTGAAGGGACTTTGGATAATGATAGTCACCTTAGTTCAGAAAAACTAGGGGTTCAGGTTGTGGAAAGCTTCTCAGAGGGTACTATTGAATCCGTCCAACTTCCAAAGCTTGATTCTCCCCCTAGTAGTGTATCTACTAATGGATCTCCATCTGCTTCTCTTCCTGCAAGCTCTGTGTCCTCTGATGCTTCGGGGACTTCAAAATCCCCAAATGAAGAACATGTTTCACCTCCAAAGGAGAAGAATGCAGATACTGGAGATGGTGAGAGCGATTCCTCAGGTGGTGCTCCATGCAATACATTTGCAAAGCCTGCTGTGACCGTGAACATTGAGCCAGAGCAAAAGATGGTGCAACAGGATATTGTAGACATGTACATGAAAAGCATGCAGCAATTCACCGAGTCTCTGGCAAAGATGAAACTCCCAATGGACATTGAAACTGAACCAACTAATTCAGGAAACTCTAGCTCTGATCAGAAACTACAAGCAGCTAAGAACAACAACAACAACAACAACAACTCCCGAGTGTTCTATGGGAGTAGAGCTTTCTTCTGA 1338 0.4514 MLLLLIDIMDSPQSVVSPFKSSPVSIEPEKQKSDLFVRNPGCLSGGIEVHRKESGMVCNMDAFVGSLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENAVSTKIINGGGQNPVFNDNLRLSVRTTESSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLNNGKLEKEFSLSSTDLFHSPAGFVRLSLSYNGASPEVMAIPALPTALATNEASQDTEISESMPSDYDAIEFPDPKIMNENQLMVSEYFGIPCTNLDSRSSEGTLDNDSHLSSEKLGVQVVESFSEGTIESVQLPKLDSPPSSVSTNGSPSASLPASSVSSDASGTSKSPNEEHVSPPKEKNADTGDGESDSSGGAPCNTFAKPAVTVNIEPEQKMVQQDIVDMYMKSMQQFTESLAKMKLPMDIETEPTNSGNSSSDQKLQAAKNNNNNNNNSRVFYGSRAFF* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0703 445 MobiDBLite consensus disorder prediction 292 361 - -
Vvi19g0703 445 MobiDBLite consensus disorder prediction 408 437 - -
Vvi19g0703 445 MobiDBLite consensus disorder prediction 292 333 - -
Vvi19g0703 445 SMART C2_3c 66 169 IPR000008 -
Vvi19g0703 445 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 60 195 IPR035892 -
Vvi19g0703 445 MobiDBLite consensus disorder prediction 406 437 - -
Vvi19g0703 445 MobiDBLite consensus disorder prediction 334 348 - -
Vvi19g0703 445 Pfam C2 domain 65 172 IPR000008 -
Vvi19g0703 445 Gene3D C2 domain 62 218 IPR035892 -
Vvi19g0703 445 ProSiteProfiles C2 domain profile. 43 171 IPR000008 -
Vvi19g0703 445 PANTHER EXPRESSED PROTEIN 9 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0703 Vvi-Chr19 7695755 7697285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0703 - - vvi:100262283 820.461