Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0702 ATGAAATCCAGCACAGAGACCTCCGATAATGGCTTTCTCCAAAGCCTCTCAACTTCATCGCTCCGCAAGCTCCTTCCCAAATCCAAGCACAAATCATCCTCATTTCGCACAAAGCCCAAATCTAACTCCGAAAACACTGATCCCAACACTCAACTGACTGATTCCCAACCGCTGCCTTCCGTCACCAAGCAATCACCACCGGAGCCAATTTTTTCCAAAGAAGTCACCAGATCGGACAGCCAGAAAGGGCTACCGATGCCTCCGGAGCCGGATCCAACCGTCAAGGTTGTGGTGAGAATTAGGCCTGTAAATGAGCATGAGAGGGAGGGTGAACGGACGGTGAAGAAACTTTCTTCAGATACATTGTCGGTTGGGGATCGGAAGTTCATGTTTGATTCAGTCTTAGATTCGAGTTCGAAGCAGGAAGATATTTTTCAGTTGGTTGGCGTGCCCTTAGTTAAAGATGCATTAGCTGGTTACAACACTTCGATTTTGTCATATGGACAGACTGGAAGCGGAAAGACTTACACAATGTGGGGTCCCCCAAGTGCCATGGTTGAGGGTCAATCCACCACCAGTCACCTGGGCATTGTTCCTCGAATTTTCCAGATGCTGTTTGCTGAGATTCAGAAAGAACAAGAGAACTTTGTAGGCAAGCAGATAAATTATCAGTGTCGGTGTTCATTCCTTGAGATATATAATGAACAAATTGGGGATTTACTTGATCCAACCCAGAGGAACCTTGAGATAAAGGATGATCCCAAAAATGGGTTTTATGTTGAGAATTTGACTGAGGAATATGTGACTAGCTATGAGGACGTAACTCAAATTTTGATCAAGGGGCTTTCAAGTAGAAAAGTTGGGGCAACAAGCATAAATTCAAAGAGCTCTCGATCCCATGTTGTGTTTACTTGCATCATTGAGTCTTGGTGCAAGGAAACCTCATCAAAATGTTTTGGTAGTTCCAAAACAAGCAGAATCAGCCTTGTTGATCTTGCAGGAATGGAAAGAAATAAACTAGATGATGCTGGTATACTAAGAGTACGGGAAGGCAAAAATGTAAAGAAGTCCCTATCACAGCTTGGGCTCTTGGTGAATGTTCTTGCTAAAGGAACTCAAATTGAGAGGCCCAAAGACATTCCTTACAGAAGTTCCTCTTTAACACATATGCTGCGAGAATCGCTTGGTGGCAATGCCAAACTAACAGTTATCTGTGCCATCTCCCCAGATAGCAAGAGTAATGGTGAAACACTGAGCACACTCAGATTTGGACAGAGAGCAAAATGCATATCAAATGAGCCAGTGATAAATGAAATAACTGAGGATCATGTCAATGATTTGAGTGATAAGATTCGCCAATTGAAGGAAGAACTTATAAGAGCAAAATCAGATGTATATAATTCCACTGGAAGTAACAATGGATACTTTAAAGGGAGAAATGTACGTGAAAGCTTGAATCAATTGAGAGTAAGCCTCAATCGCTCCTTGCTTCTTCCCCACATAGATAATGATTCTGAGGAAGAGCTAAATATTGATGAGCATGATGTAAGGGAATTACATCTGCAGCTAGATAACTTGCATAGTTCTTGTGAAGATCAATCAAAGGACTCATCTGATGACAGAGATTCCATCCATTTCTGTTCCCTAGAAGAAAATTCTGAGATGGACTTGATGAGTGAACCTGACATTAGCTGTCAAGAAGAAGGTGAAACAGGAGAAATAAACTTGGAAATACCTCAGAAGGAACTTCCTCACAACAACATGGCCACAACTATGGATAATCCTATGGATGTCCCTTCAAGAACTATGAATCCTGCATCCAGAAGTAGCCTTTCAATCAGTTCATGTCGTCAGTCTCCATTTCTCCAAGACCCTACATTGTCTGAGTCTCCAAGAATAGGAAATTCCCTGAGGAAAAGCATAATTTTCTCATCAAGCTCTTTGGCAAGTCAAAACAATGCTTCAAACAGTTTCAAGTTGAATTCAGATGTATTGCACCAGTCGCTCAAACAAAGTGATCAGATTCGATCCTCTTTGCAGTCAAGCAAGGTAATTCCAGGCACCACTGAGTCACTGGCTGCTAGCCTTCAAAGAGGTTTACAGATAATTGACTATCACCAGCGGAACTCTGCATCAAACAAATCTTCAGTTGCCTTCTCCTTTGAACACTTGGCACTGAAACCATGTCCAGAAGTAGAGAAAGTTGATGCCTCTGTTCAAAAATTTCCGGAAGAGAAGCCATCTCTAGATGCACCATCTGCTACTTTCTTGTGCACTTCTTGCCGGCGAACAGGATTTGATGGCTCTGATGAAGTCCAGGATAGCTTGAAGAGATGGATTGTAGCTGCAGATGAATCAGGGAATTCTAATGGATTGGCCAATCCAGTGTACAAAGTATCCATGAAGAGACAGAAGGAGCTAGAAAACGTTTGTATGGAGCAAGCAGCTAAAATTGAGCAGCTAAACCGTCTGGTAGAGCAACTGCAACAGAGTTCCACCACAAAATATAGCCAGGAAAGCAATACTCTTCATCTTGAAGCTGGTAACAAAGAAATAATAGCACTTGGGGAGATTAAAAATGAAGAGTACAAGCTTCTGAAATTCCATTGTGATGAGAATCATGAGCTAGAAATTATAAAGGAAATAAAGGAAGTCCAGGAAGAAACCAAGCGTGAGTGCAGGAATACATCCTTTGACATGAATGAGAAAGAAGCACTTCTTAAGGAAATTCAAAGTTTAAGGAACAAGTTGGAGTCTGATGCATCTGCAAAAATGTCTACTGAAAAACTGAGATCTTCTTTGCTCTCACGTTCCATTCAACTGCAAAAAAGTGTAGATTCTCATAATAATAGCGAGGAAGAACTAGAGAGGGAAAGGCAGAGATGGACAGAAATGGAGAGCGATTGGATTTCTCTAACAGATGAACTGAGGATTGATATTGAATCCCACCGCAGGCGGGCAGAGAAGATGGAGATGGAGTTGAGATTGGAGAAGAAGTGCACCGAAGAGTTGGATGATGCACTTCATAGAGCTGTCCTTGGGCACGCTAGATTTGTTGAACACTATGCTGACCTACAAGACAAGCATAATGAGTTGGCTGAAAAGCACCGGAATATCATGGAAGGGATAGCAGAGGTGAAGAGGGCAGCTGCAAAAGCAGGAGCTAAAGGCAATGGCTCTCGTTTTCACAAGTACCTGGCTGCAGAGCTTTCAACCCTGAGAAGGGAGAAGGAGAGAGAGAGGGAACACTTGATAAAGGAGAACAAGAGTCTCAAACTTCAACTCAGAGACACAGCAGAAGCTGTTCATGCTGCAGGGGAACTCCTTGTCAGGCTCAGAGAAGCTGAGGAAGCAGCCTCAGTCTCTGAGGACAACTACAATATGGTTCAGCAAGAGAATGAGAGGTTGAAAAAGCAAATGGAGAAGCTAAAGAGAAAACACAAGATGGAGATGGTGACAATGAAACAGTACCTTGCAGAGAGCAGGCTGCCACAATCTGCAATACTGAGTAGGGAGGATTCTGATATAGCAGAGAACAACATGATCTCTACTCCAGATGATGATCAGGCATGGAGAGCAGAGTTTGGAGCTATATATCAGGAGCATTACTAG 3612 0.4275 MKSSTETSDNGFLQSLSTSSLRKLLPKSKHKSSSFRTKPKSNSENTDPNTQLTDSQPLPSVTKQSPPEPIFSKEVTRSDSQKGLPMPPEPDPTVKVVVRIRPVNEHEREGERTVKKLSSDTLSVGDRKFMFDSVLDSSSKQEDIFQLVGVPLVKDALAGYNTSILSYGQTGSGKTYTMWGPPSAMVEGQSTTSHLGIVPRIFQMLFAEIQKEQENFVGKQINYQCRCSFLEIYNEQIGDLLDPTQRNLEIKDDPKNGFYVENLTEEYVTSYEDVTQILIKGLSSRKVGATSINSKSSRSHVVFTCIIESWCKETSSKCFGSSKTSRISLVDLAGMERNKLDDAGILRVREGKNVKKSLSQLGLLVNVLAKGTQIERPKDIPYRSSSLTHMLRESLGGNAKLTVICAISPDSKSNGETLSTLRFGQRAKCISNEPVINEITEDHVNDLSDKIRQLKEELIRAKSDVYNSTGSNNGYFKGRNVRESLNQLRVSLNRSLLLPHIDNDSEEELNIDEHDVRELHLQLDNLHSSCEDQSKDSSDDRDSIHFCSLEENSEMDLMSEPDISCQEEGETGEINLEIPQKELPHNNMATTMDNPMDVPSRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIGNSLRKSIIFSSSSLASQNNASNSFKLNSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKSSVAFSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSATFLCTSCRRTGFDGSDEVQDSLKRWIVAADESGNSNGLANPVYKVSMKRQKELENVCMEQAAKIEQLNRLVEQLQQSSTTKYSQESNTLHLEAGNKEIIALGEIKNEEYKLLKFHCDENHELEIIKEIKEVQEETKRECRNTSFDMNEKEALLKEIQSLRNKLESDASAKMSTEKLRSSLLSRSIQLQKSVDSHNNSEEELERERQRWTEMESDWISLTDELRIDIESHRRRAEKMEMELRLEKKCTEELDDALHRAVLGHARFVEHYADLQDKHNELAEKHRNIMEGIAEVKRAAAKAGAKGNGSRFHKYLAAELSTLRREKEREREHLIKENKSLKLQLRDTAEAVHAAGELLVRLREAEEAASVSEDNYNMVQQENERLKKQMEKLKRKHKMEMVTMKQYLAESRLPQSAILSREDSDIAENNMISTPDDDQAWRAEFGAIYQEHY* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0702 1203 Coils Coil 938 968 - -
Vvi19g0702 1203 Pfam Kinesin motor domain 109 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 Coils Coil 804 831 - -
Vvi19g0702 1203 MobiDBLite consensus disorder prediction 596 615 - -
Vvi19g0702 1203 FunFam Kinesin-like protein KIN-12F 89 469 - -
Vvi19g0702 1203 MobiDBLite consensus disorder prediction 1 93 - -
Vvi19g0702 1203 PRINTS Kinesin heavy chain signature 290 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 PRINTS Kinesin heavy chain signature 159 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 PRINTS Kinesin heavy chain signature 326 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 PRINTS Kinesin heavy chain signature 380 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 Coils Coil 1112 1153 - -
Vvi19g0702 1203 ProSiteProfiles Kinesin motor domain profile. 93 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 Coils Coil 900 923 - -
Vvi19g0702 1203 Coils Coil 437 464 - -
Vvi19g0702 1203 MobiDBLite consensus disorder prediction 38 79 - -
Vvi19g0702 1203 SMART kinesin_4 91 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0702 1203 Coils Coil 1067 1101 - -
Vvi19g0702 1203 PANTHER KINESIN-LIKE PROTEIN KIN-12D 23 465 IPR044986 -
Vvi19g0702 1203 Gene3D Kinesin motor domain 90 469 IPR036961 -
Vvi19g0702 1203 MobiDBLite consensus disorder prediction 1 23 - -
Vvi19g0702 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 462 IPR027417 -
Vvi19g0702 1203 Coils Coil 973 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0702 Vvi-Chr19 7676536 7684400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0702 86 465 Miscellaneous Gene Families AT5G06670 33.846 2.95e-55 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0702 K10400 - vvi:100253712 2233.37