Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0691 ATGGCTAGGACTAGCAGCAAGGTTTTGGCGCAGGTAGTGGTGGTGATGGTGCTGATTGCAATGGTGGGAGGGGCCTCGGCTGCTACCATATGCAACATAGACACCTCCAAGCTGGCTGAATGCCTACCAGCAGTGAGCGGGCGTTCACCTCCACCACCTACCAAGGCTTGTTGCACTGCCTTGCTCAGCGCCGACCTTCATTGTTTGTGCAACTACAAATCTGCCCTTCCTGCATTTGGAATCAACCCAGCACTTGCAATGGCCCTGCCAAAAAAATGCGGCGGTTCCCTCCCACCAAATTGCAAGGTGGATGCAGAGCCTTGA 324 0.5463 MARTSSKVLAQVVVVMVLIAMVGGASAATICNIDTSKLAECLPAVSGRSPPPPTKACCTALLSADLHCLCNYKSALPAFGINPALAMALPKKCGGSLPPNCKVDAEP* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0691 107 Gene3D - 27 101 IPR036312 -
Vvi19g0691 107 CDD nsLTP_like 31 99 IPR044741 -
Vvi19g0691 107 PANTHER LIPID BINDING PROTEIN-RELATED 12 101 IPR039265 GO:0005504|GO:0009627
Vvi19g0691 107 Pfam Probable lipid transfer 13 100 IPR016140 -
Vvi19g0691 107 SMART aai_6 31 101 IPR016140 -
Vvi19g0691 107 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 103 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0691 Vvi-Chr19 7518171 7518644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0691 1 102 Acyl Lipid Metabolism Gene Families AT5G55410 34.906 2.86e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0691 - - vvi:100258895 213.386