Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0687 ATGCAACATAAAGCCATCAAAGAAGAGACGGGCGGCAGAGACATGGATGGTGAGATAAAAAGCTTGATCAAGGTATGGATCTCAGCTATCAGCTCTATCTGTTATTGTTATTTCTTTGTAGTCCGCCTCCCGGTAGGTCTTTTCAGGCTCCTCTTTCTTCTTCCCATGTTTTACCTCTTCATCATCCTCCCCTTGAACCTCTCCTCCGCCCATCTTGTTGGGACCACAGCCTTTTACCTTGCTTGGCTTGCCAACTTCAAGTTTATCCTCTTCTCCTTCGGCCATGGCCCTTTATCATTCCCATCACACCCCCCAAAATCTGTCCTCCGCTTCATTTCTATTGCTTGTCTTCCTATTAAGATCAAGACTGTCCCATCTCCAAAATCACATTCAGTGTCTGAAAACAGCACGGACCCCTTATCAGAAATTGTGATGAAATTGCCTAGGCCACTTCTATTGGCTATAAAAGCATTGCTTTTTGCTATCCTGATTAGGATCTACAACTATAAACGCCATCTGCATCCAAACGTGGTCTTATTCCTCTACTGCTGCCACATGTACCTGGCCTTAGAAATTGTTCAAGCCATGGCCGCAATCCCAGCCCGTGCCATACCAGGCTTTGAGCTGGAGCCACAATTCAATGAACCCTATCTGACCACCTCTCTGCAAGACTTCTGGGGTCGTAGGTGGAACCTCTCGGTCACCAACATTCTACGGCCGACTGTATACGACCCAGTGAGAAGTATTTGTACGCGTATTTTAGGGAAGAAGTGGGCCCCGGTGCCAGGAGTGCTTGCGGCATTTTTGGTGTCGGGTCTCATGCATGAGTCATTGTACTACTATATAACGCGTGTGAGCCCCACGTGGGAGGTCACCGGCTTCTTTGTTCTTCAAGGCTTGTGTACCGTCTCCGAGGTAGTGGTGAAGAAGGCATTGGGTGGTAGGTGGCGGCTGCATCGGGCAGTTTCCGGGCCGCTGACGATTGGATTTGTGTGTGTGACGGCTGCCTGGCTGTTCTTCCCACAACTGTTGAGAAATCACATAGATGAGAGGGCCATAAGGGAGTACTCAATTTTGGTTGATTTTGTGAAGCAGAAATTCTTAACACTTCCACCACCTTTCATGGCTCATCCCTGA 1137 0.4837 MQHKAIKEETGGRDMDGEIKSLIKVWISAISSICYCYFFVVRLPVGLFRLLFLLPMFYLFIILPLNLSSAHLVGTTAFYLAWLANFKFILFSFGHGPLSFPSHPPKSVLRFISIACLPIKIKTVPSPKSHSVSENSTDPLSEIVMKLPRPLLLAIKALLFAILIRIYNYKRHLHPNVVLFLYCCHMYLALEIVQAMAAIPARAIPGFELEPQFNEPYLTTSLQDFWGRRWNLSVTNILRPTVYDPVRSICTRILGKKWAPVPGVLAAFLVSGLMHESLYYYITRVSPTWEVTGFFVLQGLCTVSEVVVKKALGGRWRLHRAVSGPLTIGFVCVTAAWLFFPQLLRNHIDERAIREYSILVDFVKQKFLTLPPPFMAHP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0687 378 Pfam Membrane bound O-acyl transferase family 210 297 IPR032805 -
Vvi19g0687 378 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 16 368 IPR044851 GO:0006629|GO:0008374
Vvi19g0687 378 PIRSF Wax_synthase 15 376 IPR017088 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0687 Vvi-Chr19 7477028 7478164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0687 15 365 Miscellaneous Gene Families AT5G55340 48.588 6.51e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0687 - - vvi:100265911 715.687