Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0677 ATGGCCACTCTCCAGCTCACAAACCCCAATGAGTTCATCTCATCCTCCTCTTCCTCCATTTCTACTGGGTTCTCCCACAAGGCACTCTCTTCAGCTGCTCCTGGGAAGTGCCTTTCCTCTAAAAATACGCGGGGAAGTCTTTGGAAACGACGCCGTTTTGGTGTGTGCTGTTCGTTTGCGCCCATGGAATCGGCTAAGATTAAGGTTGTGGGTGTCGGTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAGGGTGTTGATTTCTATGCAATAAATACAGACTCTCAAGCTCTATTACACTCTGCGGCTTCGAACCCTCTCCAAATTGGAGAACTTTTGACTCGTGGACTAGGTACGGGTGGGAATCCACTTTTGGGGGAACAGGCTGCTGAGGAATCAAAGGAAGCCATTGCAAATGCTCTCAAGGGTTCAGATCTTGTGTTTATAACAGCAGGTATGGGTGGGGGTACAGGTTCTGGGGCTGCCCCAGTTGTTGCCCAAATATCTAAGGAAGCGGGTTATTTGACTGTTGGGGTGGTCACCTACCCTTTCAGCTTTGAAGGACGTAAAAGATCACTGCAGGCATTGGAGGCTATTGAAAAGTTGCAAAAGAATGTTGACACACTAATAGTAATTCCCAATGATCGTCTGCTGGATATTGCCGATGAACAGACACCTCTTCAGGATGCTTTCCTGCTTGCTGATGATGTTTTGCGCCAAGGGGTGCAAGGGATTTCAGACATAATTACAATACCCGGGCTGGTAAATGTTGATTTTGCAGATGTAAAGGCAGTCATGAAGGACTCTGGAACTGCAATGCTTGGAGTGGGGGTTTCTTCCAGCAAAAACCGTGCAGAAGAAGCAGCCGAACAGGCAACTTTGGCTCCTCTAATTGGATCCTCTATCCAATCTGCTACAGGTGTTGTCTACAATATTACTGGGGGAAAGGACATAACCTTGCAAGAAGTTAATAGAGTGTCTCAGGTTGTTACAAGTCTGGCCGATCCTTCAGCTAACATAATATTTGGAGCTGTTGTGGACGACCGCTACAATGGGGAGATTCATGTGACTATAATTGCAACCGGGTTCTCCCAGTCTTTCCAGAAGATACTTCTAACAGACCCCAAGGCAGCAAAGCTAGTGGACAGAGTAGCAGGAGGTCAAGAAAACAAAGGACTACCCATCCCCCTCAAATCCTCTAACTCACCTCCCGCTGTTCCATCTCGGTTGCCTTCTAGAAAGCTCTTCTTTTAA 1269 0.4744 MATLQLTNPNEFISSSSSSISTGFSHKALSSAAPGKCLSSKNTRGSLWKRRRFGVCCSFAPMESAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLHSAASNPLQIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKILLTDPKAAKLVDRVAGGQENKGLPIPLKSSNSPPAVPSRLPSRKLFF* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0677 422 Hamap Cell division protein FtsZ [ftsZ]. 62 391 IPR000158 GO:0003924|GO:0005525
Vvi19g0677 422 SMART Tubulin_4 66 258 IPR003008 GO:0005525
Vvi19g0677 422 ProSitePatterns FtsZ protein signature 2. 150 171 IPR020805 GO:0005525
Vvi19g0677 422 SMART Tubulin_C_4 260 377 IPR018316 -
Vvi19g0677 422 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 159 165 IPR017975 GO:0005525|GO:0005874|GO:0007017
Vvi19g0677 422 Gene3D Tubulin/FtsZ, GTPase domain 59 273 IPR036525 -
Vvi19g0677 422 CDD FtsZ_type1 82 367 IPR000158 GO:0003924|GO:0005525
Vvi19g0677 422 Pfam FtsZ family, C-terminal domain 275 368 IPR024757 -
Vvi19g0677 422 SUPERFAMILY Tubulin C-terminal domain-like 260 374 IPR008280 -
Vvi19g0677 422 PRINTS Cell division protein FtsZ signature 179 200 IPR003008 GO:0005525
Vvi19g0677 422 PRINTS Cell division protein FtsZ signature 265 286 IPR003008 GO:0005525
Vvi19g0677 422 PRINTS Cell division protein FtsZ signature 242 264 IPR003008 GO:0005525
Vvi19g0677 422 PRINTS Cell division protein FtsZ signature 151 171 IPR003008 GO:0005525
Vvi19g0677 422 MobiDBLite consensus disorder prediction 397 416 - -
Vvi19g0677 422 Pfam Tubulin/FtsZ family, GTPase domain 66 226 IPR003008 GO:0005525
Vvi19g0677 422 NCBIfam cell division protein FtsZ 61 373 IPR000158 GO:0003924|GO:0005525
Vvi19g0677 422 Gene3D - 274 378 IPR037103 -
Vvi19g0677 422 SUPERFAMILY Tubulin nucleotide-binding domain-like 65 261 IPR036525 -
Vvi19g0677 422 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 59 374 IPR045061 GO:0003924|GO:0005525
Vvi19g0677 422 FunFam Cell division protein FtsZ 1, chloroplastic 59 273 - -
Vvi19g0677 422 FunFam Cell division protein FtsZ 1, chloroplastic 231 368 - -
Vvi19g0677 422 ProSitePatterns FtsZ protein signature 1. 97 131 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0677 Vvi-Chr19 7386286 7390599 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0677 K03531 - vvi:100243513 784.637