Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0671 ATGGCTCCAAGAGGAGAGAATAACATCGTAGTAGTTCCCAACATGAAGCTCGAGAAAGTGTTCTGCATGAAGGGGGGCAATGGAGAGGGCAGCTATGCCAATAATTCTCAGGCTCAGGCGCGACATGCTCGATCCATGCTTCATCTTCTCAGGGAAACCCTAGATGGAGTGCAACTAACTTCCCCAGAAGTCCCCTTCACGGTGGTGGACTTAGGGTGCTCCAGCGGCAGCAATACAATCTTCACCATTGAAACCATCATTAAACATATGAGCAAGCGATACGAGGAGGCCGGGTTCAAGCCACCGGAGTTCTCTGCGTTTTTCTCCGACCTCCCTTCTAATGACTTCAACACGCTCTTCCAGCTGCTCCCACCCATAGCAGACCCTGGAGTGAGCATGGAAGAGTATCTAGCAGCCAAAGGCCACAGATCATACTTTGCAGCAGCAGTTCCTGGCTCTTTCTATAAAAGACTCTTCCCTTGCAGATCAATTAATCTCTTTCACTCTGCATTTTCCTTGCACTGGCTCTCTCAGGTGCCGGATTGTGTGGTAGACAAACAATCAACGGCTTACAACGAAGGGAGGGTGTTCATCCATGGTGCCAATGAGGGCACAGCTAGCGCATACAAGAAACAGTTTCAGAGTGATCTATCCGGGTTTCTGAGATCAAGGGCACAGGAGATGATGAGTGGGGGGTCCATGTTTTTGGTGTGCCTGGGTCGCACCTCTGTGGACCCCACTGACCAGGGTGGGGCCGGACTCCTCTTTGGAACCCACTTTCAAGACGCTTGGAATGATCTTGTCCTAGAGTGTACGCGCCAAGCATACAAGACTTCAGGGAGGTGGTTGAAGCCAACGGGTCATTCACCATTAACAAGCTGGAAGTATTCAAGGGAGGGAGTCCGCTGGTGGTCAACCAACCTGACGATGAAGCCGAGGTGGGTCGAGCCCTAG 954 0.5157 MAPRGENNIVVVPNMKLEKVFCMKGGNGEGSYANNSQAQARHARSMLHLLRETLDGVQLTSPEVPFTVVDLGCSSGSNTIFTIETIIKHMSKRYEEAGFKPPEFSAFFSDLPSNDFNTLFQLLPPIADPGVSMEEYLAAKGHRSYFAAAVPGSFYKRLFPCRSINLFHSAFSLHWLSQVPDCVVDKQSTAYNEGRVFIHGANEGTASAYKKQFQSDLSGFLRSRAQEMMSGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWNDLVLECTRQAYKTSGRWLKPTGHSPLTSWKYSREGVRWWSTNLTMKPRWVEP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0671 317 Pfam SAM dependent carboxyl methyltransferase 64 270 IPR005299 GO:0008168
Vvi19g0671 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 270 IPR029063 -
Vvi19g0671 317 Gene3D - 20 270 IPR042086 -
Vvi19g0671 317 Gene3D Vaccinia Virus protein VP39 35 242 IPR029063 -
Vvi19g0671 317 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 22 270 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0671 Vvi-Chr19 7309058 7311247 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0671 K18848 - vvi:100258858 551.592