Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0669 ATGGCAGTGGCAGATGCTGAAATTCCTCTCCTTGGAGAAACTACTTGTGGTTCATTGCTGCAGAAATTGCAGCAAATCTGGGATGAGGTTGGTGAAAGCGATGAGGAACGTGATAAAATGCTCCTTCAGTTAGAGCAAGAGTGCTTGGACGTTTATAAGAGGAAGGTTGATCAGGCTGTGAAATCGAGAGCACACCTTCTTCAGGCCTTGGCAGATGCCCAACTTGAACTCTCCCGTCTTCTATCAGCACTTGGAGAGAAAAGTTTTGTTGGAATTCCTGATAAAACTTCTGGCACAATCAAGGAACAGCTTGCAGCTATAGCACCGACGCTCGAACAGCTGTGGAAACAGAAAGAAGAGAGAGTGAAGGAGTTTTCTGATGTACAGACACAGATTCAAAAGATATGTGGAGAAATTGCTGGGAACTCAAATCTTAGTGAGGTTCCTGTGGTTGATGAGGCTGACCTATCCTTGAAGAAGCTGGATGAATTTCAGGGCCAACTCCAAGAACTCCAGAAAGAAAAGAGTGACAGGTTGCACAAGGTCCTTGAGTTTGTGAGCACTGTTCATGATCTATGTGCTGTCCTTGGGATGGACTTCTTTAATACTGTTACTGAAGTTCATCCTAGCTTAAATGACTCAACTGGTGTGCAATCCAAAAGCATTAGCAATGACACCCTTTCTAGGCTGGCTAAGACAGTCTTAGCACTAAAGGAAGACAAGAAGCAGAGGCTACAGAAGCTTCAAGAGTTAGCCACTCAGCTAATTGATCTGTGGAATCTGATGGATACCCCAGAGGAGGAGCGGAGTTTGTTTGATCATGTTACCTGTAACATATCTGCTTCAGTTGATGAAGTGACCATCCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAGGTGGAAGTTGAAAGGCTTGATCAACTGAAAGCCAGCAGGATGAAGGAAATTGCTTTCAAGAGGCAAGCTGAGCTCGAAGAGATATTTGCCCGTGCTCACATAGAAATAGATCCAGAGGCTGCTCGAGCAAAGATTATGTCACTTATTGATTCTGGGGATGTTGAGCCTTCTGAGTTACTGGCCGATATGGACAATCAAATAACAAAAGCAAAGGAAGAGGCTTTCAGCAGAAAGGATATATTAGACAAGGTTGAGAAATGGATGTCAGCTTGTGAAGAAGAGAGTTGGCTTGAAGACTACAATCGGGATGAAAACAGGTATAACTCAAGCAGAGGTGCACACTTAAATCTCAAGCGTGCTGAAAAAGCTCGGATTTTAGTCAACAAAATTCCAGCTCTTGTTGACACATTGGTTGCCCAAAACTGGGGCATGGGAAGAAGATCATGGTATACCATTTACTTACGACGGTGTTCCTCTCCTTGCCATGCTAGATGA 1398 0.4442 MAVADAEIPLLGETTCGSLLQKLQQIWDEVGESDEERDKMLLQLEQECLDVYKRKVDQAVKSRAHLLQALADAQLELSRLLSALGEKSFVGIPDKTSGTIKEQLAAIAPTLEQLWKQKEERVKEFSDVQTQIQKICGEIAGNSNLSEVPVVDEADLSLKKLDEFQGQLQELQKEKSDRLHKVLEFVSTVHDLCAVLGMDFFNTVTEVHPSLNDSTGVQSKSISNDTLSRLAKTVLALKEDKKQRLQKLQELATQLIDLWNLMDTPEEERSLFDHVTCNISASVDEVTIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQAELEEIFARAHIEIDPEAARAKIMSLIDSGDVEPSELLADMDNQITKAKEEAFSRKDILDKVEKWMSACEEESWLEDYNRDENRYNSSRGAHLNLKRAEKARILVNKIPALVDTLVAQNWGMGRRSWYTIYLRRCSSPCHAR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0669 465 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 440 - -
Vvi19g0669 465 Coils Coil 231 258 - -
Vvi19g0669 465 Coils Coil 154 181 - -
Vvi19g0669 465 Gene3D - 368 443 - -
Vvi19g0669 465 Gene3D - 152 208 - -
Vvi19g0669 465 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 13 440 IPR007145 GO:0000226|GO:0008017
Vvi19g0669 465 Coils Coil 297 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0669 Vvi-Chr19 7288197 7292433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0669 13 441 EF-hand Containing Proteins AT5G62250 44.875 1.02e-114 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0669 K16732 - vvi:100267550 845.499