Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0665 ATGTTTGCATCTAGGGTTTTGTTTCGCTCGACGAGGACCCTGCTGGCACAGGGTCGCACGTCCTCCCTTCTGGCTCCTCAGAGCCACCTCAATACCTTCCTGATCGGCGAATCCACTGACAAGGTGGTTGCAACCCAGGTGTCTCTGTTGCATCACCTGGTCCACAATGCCTCCATCTTTCAAAGATTTGGAATCTCTTCATCTGCATCTCCTCAAACTAATGAAAAGGAGACAACCCAGTCTGGAAATGAACAAGGCACTGTAGAGAATGATGGTGCTCCTGCTGATGCTGAGCCTGCAAAAACAAATCAAGCAGAAGAATCAGATTCAGAGGCTGACCTGTCAATGGATGATCTGATGAAACTTGTGTTGGAGAAGGAAGAACTTCTGAAGATGAAGAACAAAGAGATTGAAAAAATGCAAGATAAAGTTCTCCGTAGTTATGCAGAAATGGAAAATGTCATGGAGAGGGCAAGACGCGAAGCAGAGAACTCCAAGAAGTTTGCCATACAGAATTTTGCAAAAAGCTTATTGGATGTTGCAGACAATCTGGGAAGAGCCTCTTTGGTGGTCAAAGAAAGTTTTTCAAAGATTGATGAATCTAAAGATACTGCTGGAGCTGTTCCACTTTTAAAAACACTTCTGGAGGGTGTTGAAATGACTGAAAAACAGCTTGGAGAGGTTTTTAGAAAGTTTGGCATGGAAAAGTTTGATCCAACAAATGAACAATTTGATCCACATAGACATAATGCAGCATTCCAAATCCCAGATCCTTCTAAGCCTTCTGGTACTGTTGCTGTGGTTCTGAAGGCGGGATACATGCTCCATGATCGGGTTATTCGGCCAGCTGAAGTTGGCGTGACCCAAGCGGTGGACAACAATGAAACGGAGGCATAA 897 0.4448 MFASRVLFRSTRTLLAQGRTSSLLAPQSHLNTFLIGESTDKVVATQVSLLHHLVHNASIFQRFGISSSASPQTNEKETTQSGNEQGTVENDGAPADAEPAKTNQAEESDSEADLSMDDLMKLVLEKEELLKMKNKEIEKMQDKVLRSYAEMENVMERARREAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTEKQLGEVFRKFGMEKFDPTNEQFDPHRHNAAFQIPDPSKPSGTVAVVLKAGYMLHDRVIRPAEVGVTQAVDNNETEA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0665 298 PANTHER GRPE PROTEIN 19 290 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 CDD GrpE 138 287 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 Hamap Protein GrpE [grpE]. 74 289 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 MobiDBLite consensus disorder prediction 68 88 - -
Vvi19g0665 298 FunFam GrpE protein homolog 233 289 - -
Vvi19g0665 298 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 235 289 IPR009012 GO:0006457
Vvi19g0665 298 Gene3D - 119 232 IPR013805 -
Vvi19g0665 298 FunFam GrpE protein homolog 117 232 - -
Vvi19g0665 298 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 127 233 IPR013805 -
Vvi19g0665 298 PRINTS GrpE protein signature 145 161 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 PRINTS GrpE protein signature 268 287 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 PRINTS GrpE protein signature 241 256 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 Coils Coil 123 168 - -
Vvi19g0665 298 Gene3D Head domain of nucleotide exchange factor GrpE 233 288 IPR009012 GO:0006457
Vvi19g0665 298 Pfam GrpE 117 288 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vvi19g0665 298 MobiDBLite consensus disorder prediction 68 114 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0665 K03687 - vvi:100252150 557.37