Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0651 ATGGCTTCTTCACCATCTTTTAGTATGTCTGCTTTGCATAGCACATGCACTCCTAGGGTGCCAAATTGCCCTAAAGAGTTCGTGGACAATCATTCAAGTTTGTACTCTAAACAACCTCTTCATTCTAAATTGATGCCTTTATCCACTGACCTAAAGCATTCAAGGTTTTTCACTAATGAGAAACCATTACAATGGGAACAAACTGCAAGACTTCCACAAAGGAATAGAGTCTTATCCTGTGCATTGGACATTGAAAATACACCTTTTTCAGTGGGCAATAAGTTCCAACTGGATGATGTTATTGAAGCTCAACAATTTGATAGAGAGACTCTCAGTGCCATATTTGAAGTGGCACGTGAGATGGAGAAGGTTGAGAAGAAATCACCTGGGAGCCAAATTCTTAAGGGTTATCTAATGGCTACACTTTTCTATGAGCCATCTACTAGAACTAGGCTCTCTTTTGAGTCTGCCATGAAAAGGTTGGGTGGGGAAGTTTTAACAACAGAAAATGCACGGGAATTCTCATCAGCAGCAAAAGGAGAGACACTTGAAGATACTATAAGAACTGTTGAAGGATACTCAGACATAATTGTAATGAGGCACTTTGAAAGTGGTGCTGCCAGAAGAGCCGCAGTCACAGCTGAGATTCCTATCATTAATGCAGGGGATGGTCCTGGACAGCATCCAACCCAGGCTCTTTTGGATGTATATACTATTGAAAGAGAGATAGGAAGACTGGATAGAATCAAAGTCGGGCTTGTTGGAGATCTTGCAAATGGAAGAACAGTCCGGTCACTTGCATATTTGCTTGCCAAGTATCAAGATGTGAAGATCTACTTTGTTTCTCCTGAAGTGGTCAAAATGAAGGATGATATAAAAGACTATCTCACATCAAAGGGAGTTGAATGGGAAGAAAGTGCTGACTTAATGGAAGTAGCTTCAAAGTGTGATGTGGTGTATCAAACTCGCATTCAGCGAGAAAGATTTGGAGAAAGGGCCGATCTCTATGAAGAAGCTCGAGGCAAGTACATTGTGGATCGAGATGTGTTAGGTGTGATGCAGAAGCATGCTGTAGTCATGCATCCCCTCCCAAGGCTTGACGAGATAACTGTGGATGTTGATGAGGATCAAAGGGCTGCCTATTTCAGACAAGCAAAGAATGGTCTCTATATTCGGATGGCTTTGTTGAAGCTCCTACTTGTTGGTTGGTGA 1212 0.42 MASSPSFSMSALHSTCTPRVPNCPKEFVDNHSSLYSKQPLHSKLMPLSTDLKHSRFFTNEKPLQWEQTARLPQRNRVLSCALDIENTPFSVGNKFQLDDVIEAQQFDRETLSAIFEVAREMEKVEKKSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAAVTAEIPIINAGDGPGQHPTQALLDVYTIEREIGRLDRIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVEWEESADLMEVASKCDVVYQTRIQRERFGERADLYEEARGKYIVDRDVLGVMQKHAVVMHPLPRLDEITVDVDEDQRAAYFRQAKNGLYIRMALLKLLLVGW* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0651 403 NCBIfam aspartate carbamoyltransferase 99 400 IPR002082 GO:0004070|GO:0006207
Vvi19g0651 403 PRINTS Aspartate carbamoyltransferase signature 381 395 - -
Vvi19g0651 403 PRINTS Aspartate carbamoyltransferase signature 359 364 - -
Vvi19g0651 403 PRINTS Aspartate carbamoyltransferase signature 133 155 - -
Vvi19g0651 403 PRINTS Aspartate carbamoyltransferase signature 173 182 - -
Vvi19g0651 403 PRINTS Aspartate carbamoyltransferase signature 227 244 - -
Vvi19g0651 403 PRINTS Aspartate carbamoyltransferase signature 319 328 - -
Vvi19g0651 403 Gene3D Aspartate/ornithine carbamoyltransferase 228 387 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 Hamap Aspartate carbamoyltransferase [pyrB]. 97 402 IPR002082 GO:0004070|GO:0006207
Vvi19g0651 403 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 249 398 IPR006131 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 Gene3D Aspartate/ornithine carbamoyltransferase 100 396 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 ProSitePatterns Aspartate and ornithine carbamoyltransferases signature. 143 150 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 FunFam Aspartate carbamoyltransferase 2 231 387 - -
Vvi19g0651 403 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 94 400 - -
Vvi19g0651 403 FunFam Aspartate carbamoyltransferase 99 230 - -
Vvi19g0651 403 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 365 388 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 228 239 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 143 162 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 355 364 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 95 400 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vvi19g0651 403 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 99 240 IPR006132 GO:0006520|GO:0016743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0651 K00609 - vvi:100246977 796.964