Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0648 ATGAATACGCTGAGGATTAAGAGGGTACCCACCGTGGTTTCGAATTACCAGAAGGAGGATTCAGACGATGGTGCTCGTCAGGTTGGTGGTTGCGGCCGCAATTGCCTCAAGCAGTGCTGCATTCAAGGAGCAAAACTCCCTCTTTATGCCTACAAGAAGGTGAAGGACGTTGTTAACGAGAAAGCTTCGAGCGGTGATGAAAACAAAGAGCAGCCTGTGCCCTTCCTTGACTCTCTCGTTCTTGGAGAGTGGGAGGATCGTATGCAGAAAGGGCTCTTTCGATATGATGTCACTGCTTGCGAAACCAAGGTGATTCCGGGTGAGTATGGGTTCATTGCCCAGCTGAATGAGGGCCGCCACCTGAAGAAGAGGCCCACTGAGTTCCGTGTGGATAAAGTCCTCCAGCCCTTTGATGGGAACAAATTCAACTTCACTAAAGTTGGGCAAGAGGAGGTGCTCTTCCAGTTTGAACCAAGCAATGATGAGGAACCTGAGTTCATCCCCAATGCTCCCATTGATGTCGAAAATTCTACAAGCGTTGTTGCCATCAATGTTAGTCCTATTGAATATGGGCATGTGCTTCTAATCCCAAGGATTTTCGAGTGCTTGCCGCAGAGGATCGACCGCGAAAGCTTTTTGCTTGCCCTTGACATGGCTGTGGAAGCAGGAAATCCATATTTCCGGTTGGGTTACAACAGCTTGGGTGCATTTGCTACCATCAACCACCTTCACTTTCAGGCTTATTACTTGGCCACACCCTTTCCCATTGAGAAGGCTCCAACTAGGAAAATAACCACTGCAGGCAATGGGGTGAAGATCTTTGAGCTGTTAAAATATCCTGTTAGAGGTCTTGTCTTTGAGGGTGGAGACACTCTGCAAGATTTAGCGAACACTGTGGCCGATTCCTGCATTTGCCTTCAGGATAACAACATACCTTTCAATGTTCTCATTGCTGATGCTGGGAAACGTATCTTTCTCTTTGCACAGTGTTATGCTGAGAAACAAGCTCTTGGGGAAGTGAATCAGGAGCTTCTGGACACCCAAGTGAACCCAGCTGTCTGGGAGGTTAGTGGACATATTGTGCTGAAAAGGAAGGAGGACTATGAGGGGGCATCTGAGCAGAATGCTTGGAGGCTTCTTGCTGAGGTCTCTCTCTCTGAAGAGAGGTTCCAAGAAGTGAATGCTCTTATCTTTGAAGCCATTGCCTGTGGAGATGATGAAAAAGGAAATCTCACCGAGGACATGATTGAGGAGCCAGATGTCACACCTCCATCTCATGAAGATGCAGGTGCCATCAACAATAGCTCCTACCCTGCTGCCATGGTGGCTGGAAAGCAAGAATGCCTAGTTCAGCAGTAA 1359 0.4812 MNTLRIKRVPTVVSNYQKEDSDDGARQVGGCGRNCLKQCCIQGAKLPLYAYKKVKDVVNEKASSGDENKEQPVPFLDSLVLGEWEDRMQKGLFRYDVTACETKVIPGEYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEPSNDEEPEFIPNAPIDVENSTSVVAINVSPIEYGHVLLIPRIFECLPQRIDRESFLLALDMAVEAGNPYFRLGYNSLGAFATINHLHFQAYYLATPFPIEKAPTRKITTAGNGVKIFELLKYPVRGLVFEGGDTLQDLANTVADSCICLQDNNIPFNVLIADAGKRIFLFAQCYAEKQALGEVNQELLDTQVNPAVWEVSGHIVLKRKEDYEGASEQNAWRLLAEVSLSEERFQEVNALIFEAIACGDDEKGNLTEDMIEEPDVTPPSHEDAGAINNSSYPAAMVAGKQECLVQQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0648 452 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 5 403 IPR026506 GO:0080048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0648 Vvi-Chr19 7106179 7108166 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0648 K14190 - vvi:100253859 917.146